RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ISXQ2M1V0 245 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 NYAP1Q6ZVC0 841 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 CPNE8Q86YQ8 564 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 LRRC8AQ8IWT6 810 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 RHOT2Q8IXI1 618 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 ATXN7L3BQ96GX2 97 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 PEBP4Q96S96 227 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 LRRC61Q9BV99 259 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 DUSP23Q9BVJ7 150 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 C1QTNF2Q9BXJ5 285 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 KLC2Q9H0B6 622 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 OR12D3Q9UGF7 316 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 APOBEC3BQ9UH17 382 aaKnown RBP15.84■□□□□ 0.13
SKA2-209ENST00000583976 FZD10Q9ULW2 581 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 HS3ST3A1Q9Y663 406 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 TEX51A0A1B0GUA7 166 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 RCCD1A6NED2 376 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 NEMP2A6NFY4 417 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 NEMP1O14524 444 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 PRPSAP2O60256 369 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 RAMP2O60895 175 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 GCATO75600 419 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 DXOO77932 396 aaKnown RBP15.83■□□□□ 0.12
SKA2-209ENST00000583976 TMCC1O94876 653 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 TCF4P15884 667 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 RHOQP17081 205 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 MAPKAPK2P49137 400 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 ZNF805Q5CZA5 627 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 EFHC2Q5JST6 749 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 KIAA1328Q86T90 577 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 SLC35F3Q8IY50 421 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 PHACTR4Q8IZ21 702 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 DENND6BQ8NEG7 585 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 OR2AP1Q8NGE2 309 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 NTAN1Q96AB6 310 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 TBC1D31Q96DN5 1066 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 FEM1CQ96JP0 617 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 EXOC2Q96KP1 924 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 ZNF578Q96N58 590 aaPredicted RBP15.83■□□□□ 0.12
SKA2-209ENST00000583976 KLHL32Q96NJ5 620 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 WRAP53Q9BUR4 548 aaKnown RBP15.83■□□□□ 0.12
SKA2-209ENST00000583976 ABCG4Q9H172 646 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 NOL6Q9H6R4 1146 aaKnown RBP15.83■□□□□ 0.12
SKA2-209ENST00000583976 ZWILCHQ9H900 591 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 POLR1BQ9H9Y6 1135 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 TMEM248Q9NWD8 314 aa15.83■□□□□ 0.12
SKA2-209ENST00000583976 IPO11Q9UI26 975 aaKnown RBP15.83■□□□□ 0.12
SKA2-209ENST00000583976 ANKRD36A6QL64 1941 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 AREL1O15033 823 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 MUSKO15146 869 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 TSPAN6O43657 245 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 LZTS3O60299 673 aaPredicted RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 PROSCO94903 275 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 GSRP00390 522 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 PTMAP06454 111 aaKnown RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 PLA2G2AP14555 144 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 LSSP48449 732 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 DUSP3P51452 185 aaPredicted RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 NRG1Q02297 640 aaPredicted RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 SLC20A2Q08357 652 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 SGCGQ13326 291 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 CA9Q16790 459 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 PRRT3Q5FWE3 981 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 ERMARDQ5T6L9 678 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 ACBD5Q5T8D3 534 aaPredicted RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 ARHGAP40Q5TG30 622 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 DCP2Q8IU60 420 aaKnown RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 NIPA2Q8N8Q9 360 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 CCDC112Q8NEF3 446 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 FAM174AQ8TBP5 190 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 KCNE4Q8WWG9 221 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 ISG20Q96AZ6 181 aaKnown RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 LENG8Q96PV6 779 aaPredicted RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 SNRNP25Q9BV90 132 aaKnown RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 SEMA4CQ9C0C4 833 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 DHX35Q9H5Z1 703 aaKnown RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 SYNDIG1Q9H7V2 258 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 USP29Q9HBJ7 922 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 MBNL1Q9NR56 388 aaKnown RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 AP4E1Q9UPM8 1137 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 ENTPD2Q9Y5L3 495 aa15.82■□□□□ 0.12
SKA2-209ENST00000583976 FLNBO75369 2602 aaKnown RBP15.82■□□□□ 0.12
SKA2-209ENST00000583976 A0A0U1RQJ8 604 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 TK2O00142 265 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 INSIG1O15503 277 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 KLK10O43240 276 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 BUB1O43683 1085 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 CREB3O43889 395 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 MMP20O60882 483 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 PIGNO95427 931 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 IL1R2P27930 398 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 PCK1P35558 622 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 GJC1P36383 396 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 VAV2P52735 878 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 TMPRSS3P57727 454 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 POLD3Q15054 466 aaPredicted RBP15.81■□□□□ 0.12
SKA2-209ENST00000583976 IRF4Q15306 451 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 NR0B2Q15466 257 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 SMTNL2Q2TAL5 461 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 TXNRD3NBQ6F5E7 133 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms