RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ENC1O14682 589 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 HYAL3O43820 417 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 PIAS2O75928 621 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 LDOC1O95751 146 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 CSF2P04141 144 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 PROS1P07225 676 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 ATXN1LP0C7T5 689 aaKnown RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 NME1P15531 152 aaKnown RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 MX2P20592 715 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 FECHP22830 423 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 XPAP23025 273 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 DGKAP23743 735 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 KDELR1P24390 212 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 NFKBIAP25963 317 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 GARSP41250 739 aaKnown RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 SLC1A1P43005 524 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 SCNN1BP51168 640 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 CLDN2P57739 230 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 TAS2R40P59535 323 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 IL9RQ01113 521 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 MMRN1Q13201 1228 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 PTK2BQ14289 1009 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 FZD2Q14332 565 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 ZNF235Q14590 738 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 SMAD1Q15797 465 aaKnown RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 IFI16Q16666 785 aaKnown RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 ATP13A4Q4VNC1 1196 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 PRAMEF14Q5SWL7 426 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 CFAP58Q5T655 872 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 MARC1Q5VT66 337 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 NCBP2-AS2Q69YL0 99 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 TIGD7Q6NT04 549 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 TMPRSS7Q7RTY8 843 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 PTAR1Q7Z6K3 402 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 PARGQ86W56 976 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 GATAD2AQ86YP4 633 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 CACTIN-AS1Q8N1I8 211 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 GALNT15Q8N3T1 639 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 SLC25A45Q8N413 288 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 CHCHD4Q8N4Q1 142 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 FAM181AQ8N9Y4 354 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 KDF1Q8NAX2 398 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 TP53I13Q8NBR0 393 aaPredicted RBP9.97□□□□□ -0.81
SKA2-208ENST00000583927 NETO2Q8NC67 525 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 KCTD6Q8NC69 237 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 OR4C6Q8NH72 309 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 HDAC11Q96DB2 347 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 CALN1Q9BXU9 219 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 USP29Q9HBJ7 922 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 HAUS2Q9NVX0 235 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
SKA2-208ENST00000583927 APC2O95996 2303 aa9.96□□□□□ -0.81
SKA2-208ENST00000583927 SCN8AQ9UQD0 1980 aa9.96□□□□□ -0.81
SKA2-208ENST00000583927 A0A0A6YYK5 440 aaPredicted RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 NEMP2A6NFY4 417 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 H3BM21 787 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 SCAMP1O15126 338 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 MATN3O15232 486 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 MFSD11O43934 449 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 MMP20O60882 483 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 TOP3BO95985 862 aaKnown RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 CAPNS1P04632 268 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 HOXC4P09017 264 aaPredicted RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 GIMD1P0DJR0 217 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 C6P13671 934 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 CKMT2P17540 419 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 ACP1P24666 158 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 IGFALSP35858 605 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 SSR1P43307 286 aaKnown RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 MMP13P45452 471 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 ACADVLP49748 655 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 MESDQ14696 234 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 LRRC14Q15048 493 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 PROX2Q3B8N5 592 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 UNQ6494/PRO21346Q6UXR6 183 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 LIPIQ6XZB0 460 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 CCNI2Q6ZMN8 369 aaPredicted RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 MACC1Q6ZN28 852 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 DPPA4Q7L190 304 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 ZSWIM9Q86XI8 627 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 RAVER1Q8IY67 606 aaKnown RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 CBARPQ8N350 705 aaPredicted RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 SDR16C5Q8N3Y7 309 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 PGBD5Q8N414 524 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 EID2Q8N6I1 236 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 PQLC3Q8N755 202 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 BTN2A2Q8WVV5 523 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 CNDP2Q96KP4 475 aaKnown RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 CALR3Q96L12 384 aaKnown RBP9.96□□□□□ -0.82
SKA2-208ENST00000583927 NSMCE3Q96MG7 304 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 RNF157Q96PX1 679 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 PANX2Q96RD6 677 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 MYOCQ99972 504 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 DUSP23Q9BVJ7 150 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 SPTLC3Q9NUV7 552 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 NLGN3Q9NZ94 848 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 KLK13Q9UKR3 277 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 PHTF1Q9UMS5 762 aa9.96□□□□□ -0.82
SKA2-208ENST00000583927 PKD1L2Q7Z442 2459 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms