RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LGMNQ99538 433 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 ELF4Q99607 663 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 SEMA3CQ99985 751 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 C1QTNF2Q9BXJ5 285 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 ANKRD36A6QL64 1941 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 TMEM131Q92545 1883 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 TP53BP1Q12888 1972 aaPredicted RBP12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 A0A0U1RQJ8 604 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 A0A1W2PQ67 120 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 GRID2IPA4D2P6 1211 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 A6NNZ2 444 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 KCNK1O00180 336 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 TRAFD1O14545 582 aaPredicted RBP12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 FPGTO14772 594 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 GIPC1O14908 333 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 CST8O60676 142 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 CPP00450 1065 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 JCHAINP01591 159 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 HLA-DQB2P05538 268 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 MMP12P39900 470 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 DSC2Q02487 901 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 PPIDQ08752 370 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 TRAF2Q12933 501 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 SUZ12Q15022 739 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 TAZQ16635 292 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 TMEM52BQ4KMG9 183 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 TFDP3Q5H9I0 405 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 PIP4P1Q86T03 277 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 SPATS2Q86XZ4 545 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 OXR1Q8N573 874 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 CCDC112Q8NEF3 446 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 OR13H1Q8NG92 308 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 ASB12Q8WXK4 309 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 CAMK1GQ96NX5 476 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 C1QTNF7Q9BXJ2 289 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 SEPT10Q9P0V9 454 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 AMACRQ9UHK6 382 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 COQ6Q9Y2Z9 468 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 PCDHB9Q9Y5E1 797 aa12.69□□□□□ -0.38
SMARCE1-218ENST00000582955 KNL1Q8NG31 2342 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 hCG_1818297A0A087WSY0 165 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 A0A1B0GTQ1 180 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 MED19A0JLT2 244 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 POM121BA6NF01 834 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 A8MX80 341 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 ARHGAP6O43182 974 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 HTRA2O43464 458 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 LZTS3O60299 673 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 C6P13671 934 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 CEACAM1P13688 526 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 PECAM1P16284 738 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 TGM2P21980 687 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 CTNNA2P26232 953 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 NR2C2P49116 596 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 ARRB1P49407 418 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 LIG3P49916 1009 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 ZBTB17Q13105 803 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 ARMC12Q5T9G4 340 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 KYAT3Q6YP21 454 aaKnown RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 Q6ZSR6 202 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 B4GALNT4Q76KP1 1039 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 BZW1Q7L1Q6 419 aaKnown RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 PEX26Q7Z412 305 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 ABI3BPQ7Z7G0 1075 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 SYCE1Q8N0S2 351 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 DENND6BQ8NEG7 585 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 P3H4Q92791 437 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 HAUS1Q96CS2 278 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 BMFQ96LC9 184 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 OLFM3Q96PB7 478 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 LENG8Q96PV6 779 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 KLF6Q99612 283 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 HEMGNQ9BXL5 484 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 CEP41Q9BYV8 373 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 AMFRQ9UKV5 643 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 PCDHGB2Q9Y5G2 931 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 PCDHA3Q9Y5H8 950 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 RAI2Q9Y5P3 530 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 HS3ST3A1Q9Y663 406 aa12.68□□□□□ -0.38
SMARCE1-218ENST00000582955 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 YKT6O15498 198 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 FLRT2O43155 660 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 PGLSO95336 258 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 ITGAVP06756 1048 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 ELFN1P0C7U0 828 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 CES1P23141 567 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 NFKBIAP25963 317 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 IGFALSP35858 605 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 CETN2P41208 172 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 RABIFP47224 123 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 RWDD2BP57060 319 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 COPS2P61201 443 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 IFI35P80217 286 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 ADCY2Q08462 1091 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms