RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 EPGNQ6UW88 154 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 TTC16Q8NEE8 873 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 SPPL2BQ8TCT7 592 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 STYXQ8WUJ0 223 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 HDAC10Q969S8 669 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 ZNF512Q96ME7 567 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-205ENST00000582730 NDE1Q9NXR1 346 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 GTSE1Q9NYZ3 720 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 PLA2G4CQ9UP65 541 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 ACTL7AQ9Y615 435 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 ZBTB14O43829 449 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 RPL14P50914 215 aaKnown RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 CDC16Q13042 620 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 GALNT3Q14435 633 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 SIRPB2Q5JXA9 342 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 PGBD5Q8N414 524 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 HIPK4Q8NE63 616 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 RDH11Q8TC12 318 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 MARK4Q96L34 752 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 FAM210AQ96ND0 272 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 CASD1Q96PB1 797 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 DRC3Q9H069 523 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 MRPL46Q9H2W6 279 aaKnown RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 SUDS3Q9H7L9 328 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 MRM3Q9HC36 420 aaKnown RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 ZDHHC2Q9UIJ5 367 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 RAP2CQ9Y3L5 183 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 MYLKQ15746 1914 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 F5H5T6 163 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 PQBP1O60828 265 aaKnown RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 ALOX15P16050 662 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 GPR17Q13304 367 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 IHHQ14623 411 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 PTPRCAPQ14761 206 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 LHX8Q68G74 356 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 IL31Q6EBC2 164 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 MYLK4Q86YV6 388 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 GABPB2Q8TAK5 448 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 SCLYQ96I15 445 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 OLFM1Q99784 485 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 CENPKQ9BS16 269 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 POMKQ9H5K3 350 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 GPAMQ9HCL2 828 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 VPS45Q9NRW7 570 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 PPM1HQ9ULR3 514 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 CRYL1Q9Y2S2 319 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 SLC4A7Q9Y6M7 1214 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 CASP8AP2Q9UKL3 1982 aa13.76□□□□□ -0.21
SRSF1-205ENST00000582730 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-205ENST00000582730 VWA8A3KMH1 1905 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 TMEM233B4DJY2 109 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 HDAC3O15379 428 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 MMP2P08253 660 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 MYL4P12829 197 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 TACR2P21452 398 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 FGFR3P22607 806 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 ARSDP51689 593 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 ASPHQ12797 758 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 NET1Q7Z628 596 aaPredicted RBP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 TMEM151AQ8N4L1 468 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 EXT2Q93063 718 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 A0A0D9SEW6 157 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 CCDC166P0CW27 439 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 COL6A2P12110 1019 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 HNRNPLP14866 589 aaKnown RBP eCLIP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 TFEBP19484 476 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 ACTR3P61158 418 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 AP2B1P63010 937 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 PRKAA1Q13131 559 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 TRMT5Q32P41 509 aaKnown RBP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 PABPC1LQ4VXU2 614 aaKnown RBP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 NADSYN1Q6IA69 706 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 FRMD7Q6ZUT3 714 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 DEFB107AQ8IZN7 70 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 OR13J1Q8NGT2 312 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 SEPT8Q92599 483 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 EXOC2Q96KP1 924 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 EBF3Q9H4W6 596 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 SLC38A8A6NNN8 435 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 AIM2O14862 343 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 ADAM12O43184 909 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 CCL23P55773 120 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 POU4F1Q01851 419 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 KLF10Q13118 480 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 LSAMPQ13449 338 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 BFSP2Q13515 415 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 MRPL58Q14197 206 aaKnown RBP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 TMEM198Q66K66 360 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 ACAD11Q709F0 780 aa13.75□□□□□ -0.21
SRSF1-205ENST00000582730 RPS27LQ71UM5 84 aaKnown RBP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 CCDC117Q8IWD4 279 aaPredicted RBP13.75□□□□□ -0.21
SRSF1-205ENST00000582730 RYBPQ8N488 228 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms