RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 CCDC25Q86WR0 208 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 SLC39A11Q8N1S5 342 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 ZCCHC9Q8N567 271 aaKnown RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 PQLC3Q8N755 202 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 ATP6V0D2Q8N8Y2 350 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 PCDH19Q8TAB3 1148 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 SCAMP5Q8TAC9 235 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 TFB1MQ8WVM0 346 aaKnown RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 NDRG1Q92597 394 aaKnown RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 PTPRN2Q92932 1015 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 NINJ1Q92982 152 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 TRIM43Q96BQ3 446 aaPredicted RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 RTP4Q96DX8 246 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 PGLYRP2Q96PD5 576 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 HAPLN3Q96S86 360 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 FAM118BQ9BPY3 351 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 TMEM121Q9BTD3 319 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 KLC2Q9H0B6 622 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 RAB6CQ9H0N0 254 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 STMN4Q9H169 189 aaPredicted RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 PABPC3Q9H361 631 aaKnown RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 CATSPERBQ9H7T0 1116 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 WDR6Q9NNW5 1121 aaKnown RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 AP5S1Q9NUS5 200 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 MTMR10Q9NXD2 777 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 IL37Q9NZH6 218 aa6.64□□□□□ -1.35
TVP23B-209ENST00000581733 CWC15Q9P013 229 aaKnown RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 CNOT11Q9UKZ1 510 aaKnown RBP6.64□□□□□ -1.35
TVP23B-209ENST00000581733 FAM92AA1XBS5 289 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 HMGB1P1B2RPK0 211 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 CHADO15335 359 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 EIF3HO15372 352 aaKnown RBP eCLIP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 KCNN4O15554 427 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 FGBP02675 491 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 NUDT17P0C025 328 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 MYZAPP0CAP1 466 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 CSH1P0DML2 217 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 CSH2P0DML3 217 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ATP2A2P16615 1042 aaKnown RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 IL4RP24394 825 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 IVDP26440 423 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ELF1P32519 619 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 OR1D2P34982 312 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 FDFT1P37268 417 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 PBX3P40426 434 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ALDH1A3P47895 512 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 CENPFP49454 3210 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ATXN1P54253 815 aaKnown RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ARL4CP56559 192 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 TBX4P57082 545 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 PITX1P78337 314 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 DEFB103AP81534 67 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 SEMA3BQ13214 749 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 KCNAB2Q13303 367 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 DPYSQ14117 519 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 PAFAH1B3Q15102 231 aaKnown RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 PRSS53Q2L4Q9 553 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 RNASEH2BQ5TBB1 312 aaKnown RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 NCBP2-AS2Q69YL0 99 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 HIBCHQ6NVY1 386 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 RHBDF2Q6PJF5 856 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 PRSS55Q6UWB4 352 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 NPNTQ6UXI9 565 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 LRRC31Q6UY01 552 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 CYP2R1Q6VVX0 501 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ARHGEF18Q6ZSZ5 1173 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 CENPUQ71F23 418 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ZC3H18Q86VM9 953 aaKnown RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 RNF168Q8IYW5 571 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ADGRG2Q8IZP9 1017 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 IQCKQ8N0W5 287 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 VPS52Q8N1B4 723 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ZNF276Q8N554 614 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 LZTR1Q8N653 840 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 FAM71DQ8N9W8 422 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ATAD1Q8NBU5 361 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 STKLD1Q8NE28 680 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 TBC1D31Q96DN5 1066 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 B3GALT6Q96L58 329 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 FCRL2Q96LA5 508 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 PTCHD1Q96NR3 888 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ZIM3Q96PE6 472 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ZFYVE21Q9BQ24 234 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 CCDC77Q9BR77 488 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 TTLL2Q9BWV7 592 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 TXLNGYQ9BZA5 131 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 TKTL2Q9H0I9 626 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 MRPL17Q9NRX2 175 aaKnown RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 INTS7Q9NVH2 962 aaKnown RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 ARHGEF38Q9NXL2 777 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 SAE1Q9UBE0 346 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 UXTQ9UBK9 157 aaPredicted RBP6.63□□□□□ -1.35
TVP23B-209ENST00000581733 RWDD3Q9Y3V2 267 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 INSL6Q9Y581 213 aa6.63□□□□□ -1.35
TVP23B-209ENST00000581733 WDR27A2RRH5 827 aa6.62□□□□□ -1.35
TVP23B-209ENST00000581733 GOLGA6CA6NDK9 693 aa6.62□□□□□ -1.35
TVP23B-209ENST00000581733 C5orf60A6NFR6 353 aa6.62□□□□□ -1.35
TVP23B-209ENST00000581733 SLC38A8A6NNN8 435 aa6.62□□□□□ -1.35
TVP23B-209ENST00000581733 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms