RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FAM72CH0Y354 149 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 SLC25A17O43808 307 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 DHX16O60231 1041 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 FGF17O60258 216 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 DHRS4L1P0CG22 281 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 TNNT1P13805 278 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 HNF1BP35680 557 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 NLRP5P59047 1200 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 ECT2LQ008S8 904 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 RPE65Q16518 533 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 GRAMD1BQ3KR37 738 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 FAM72AQ5TYM5 149 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 NAPEPLDQ6IQ20 393 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 FAM72DQ6L9T8 149 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 GJB7Q6PEY0 223 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 NEK10Q6ZWH5 1172 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 FAM72BQ86X60 149 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 MCPH1Q8NEM0 835 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 RASSF8Q8NHQ8 419 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 SPATA22Q8NHS9 363 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 SPPL3Q8TCT6 385 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 TRIB2Q92519 343 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 TBC1D20Q96BZ9 403 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 COG8Q96MW5 612 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 NPLQ9BXD5 320 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 FBRSL1Q9HCM7 1045 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 WDR6Q9NNW5 1121 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 ATP8A2Q9NTI2 1148 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 FBXO40Q9UH90 709 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 CD207Q9UJ71 328 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 IRAK2O43187 625 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 ANP32CO43423 234 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 CLDN14O95500 239 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 ADAP00813 363 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 GPR12P47775 334 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 NOVP48745 357 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 CAPSQ13938 189 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 DENND1BQ6P3S1 775 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 SATL1Q86VE3 508 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 HERC6Q8IVU3 1022 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 MAPK1IP1LQ8NDC0 245 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 DNAAF1Q8NEP3 725 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 TAS1R2Q8TE23 839 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 TBC1D22AQ8WUA7 517 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 TTC12Q9H892 705 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 DDX43Q9NXZ2 648 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 CGNL1Q0VF96 1302 aa3.42□□□□□ -1.86
SMCHD1-206ENST00000581631 PEX12O00623 359 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 SERPINC1P01008 464 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 WEE2P0C1S8 567 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 KCNA5P22460 613 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 MYF6P23409 242 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 FUT6P51993 359 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 ARSFP54793 590 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 LPIN1Q14693 890 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 SLC18A3Q16572 532 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 TMEM30BQ3MIR4 351 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 KLHL24Q6TFL4 600 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 NKAPQ8N5F7 415 aaKnown RBP3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 SPATA5Q8NB90 893 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 HSPH1Q92598 858 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 STAMQ92783 540 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 ANKRD9Q96BM1 317 aaPredicted RBP3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 OR1F2PQ96R84 312 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 STN1Q9H668 368 aaKnown RBP3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 LRRC4Q9HBW1 653 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 NOD2Q9HC29 1040 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 ENTPD7Q9NQZ7 604 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 RASSF1Q9NS23 344 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 ZNF224Q9NZL3 707 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 CNPY2Q9Y2B0 182 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 GDAQ9Y2T3 454 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 PCDHGB3Q9Y5G1 929 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 CLDN16Q9Y5I7 305 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 SMAD5-AS1Q9Y6J3 95 aa3.41□□□□□ -1.86
SMCHD1-206ENST00000581631 IGKV3D-15A0A087WSY6 115 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 VWA3AA6NCI4 1184 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 KLK10O43240 276 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 EXTL3O43909 919 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 CTPS1P17812 591 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 CD53P19397 219 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 PAPOLAP51003 745 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 ARL4CP56559 192 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 SLC18A2Q05940 514 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 ZNF155Q12901 538 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 ANKRD1Q15327 319 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 DCAF6Q58WW2 860 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 ARHGAP17Q68EM7 881 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 FAM76AQ8TAV0 307 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 LRFN5Q96NI6 719 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 CLSTN3Q9BQT9 956 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 LMAN2LQ9H0V9 348 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 MROH8Q9H579 483 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 SLC32A1Q9H598 525 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 OR6C3Q9NZP0 311 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 SUFUQ9UMX1 484 aa3.4□□□□□ -1.87
SMCHD1-206ENST00000581631 WNT9BO14905 357 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms