RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CHRNB2P17787 502 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 MLH1P40692 756 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 KCNJ4P48050 445 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 ALDH7A1P49419 539 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 GRIK3Q13003 919 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 HSPB2Q16082 182 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 CCNG2Q16589 344 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 COL28A1Q2UY09 1125 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 PRAMEF19Q5SWL8 479 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM205BPQ63HN1 556 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 TTI2Q6NXR4 508 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 CYP20A1Q6UW02 462 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 FASTKD5Q7L8L6 764 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 PIP4P1Q86T03 277 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 NOXA1Q86UR1 476 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 DENND6AQ8IWF6 608 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 ENGASEQ8NFI3 743 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 CREB3L4Q8TEY5 395 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 TMEM18Q96B42 140 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 VCPIP1Q96JH7 1222 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 LYZL4Q96KX0 146 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 MARK4Q96L34 752 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 WDFY2Q96P53 400 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 TREX2Q9BQ50 279 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 MXRA8Q9BRK3 442 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 FTOQ9C0B1 505 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 NPFFR1Q9GZQ6 430 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 VPS33BQ9H267 617 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 MUC13Q9H3R2 512 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 KLHL31Q9H511 634 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 SCPEP1Q9HB40 452 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 FZD3Q9NPG1 666 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 EHD2Q9NZN4 543 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 SLCO3A1Q9UIG8 710 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 DYTNA2CJ06 578 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM90A8PA6NJQ4 464 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 LIPT2A6NK58 231 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 SEC14L5O43304 696 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 MLYCDO95822 493 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 MT-CYBP00156 380 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 IFNA2P01563 188 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 KLKB1P03952 638 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM90A13PP0C7W8 464 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM90A24PP0C7X0 464 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 TGFB3P10600 412 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 RARGP13631 454 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 ITGAXP20702 1163 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 HTR6P50406 440 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 CLNS1AP54105 237 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 HDAC4P56524 1084 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 PDE1CQ14123 709 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 FGFBP1Q14512 234 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 LPIN1Q14693 890 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 ARHGEF6Q15052 776 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 SOWAHAQ2M3V2 549 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 DPCR1Q3MIW9 517 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 Q5PR19 223 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 WASHC2DQ5SRD0 308 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 SPATA1Q5VX52 437 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 ZNF549Q6P9A3 640 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 TSSK4Q6SA08 328 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 RBFAQ8N0V3 343 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 MMP21Q8N119 569 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 ZCCHC9Q8N567 271 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 TTC39CQ8N584 583 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 FRMD1Q8N878 549 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 MPLKIPQ8TAP9 179 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 PSPC1Q8WXF1 523 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 INPP5DQ92835 1189 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 GHITMQ9H3K2 345 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 PLEKHA4Q9H4M7 779 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 POLR1BQ9H9Y6 1135 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 HAUS2Q9NVX0 235 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 HCFC1R1Q9NWW0 138 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 A3GALT2U3KPV4 340 aa4.87□□□□□ -1.63
SMCHD1-205ENST00000581383 A6NCN8 305 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 USP17L23D6RBM5 183 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 BCAT2O15382 392 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 EPN2O95208 641 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 EIF2S1P05198 315 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 DCTDP32321 178 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 GABRB2P47870 512 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 PIP4K2AP48426 406 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 CEBPZQ03701 1054 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM27E3Q08E93 113 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 GOLGA8DPQ0D2H9 430 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 FOXD4Q12950 439 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 PRKG2Q13237 762 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 ITGADQ13349 1161 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 MEA1Q16626 185 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 DUSP6Q16828 381 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 ALG11Q2TAA5 492 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 CCDC129Q6ZRS4 1044 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 GSTA5Q7RTV2 222 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 TRAPPC11Q7Z392 1133 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 CTU1Q7Z7A3 348 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 TMEM199Q8N511 208 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 PARP16Q8N5Y8 322 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms