RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 TNFRSF4P43489 277 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 SLCO1A2P46721 670 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 GRIA4P48058 902 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 GALK1P51570 392 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 MESP2Q0VG99 397 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 SMAD2Q15796 467 aaKnown RBP11.11□□□□□ -0.63
SKA2-206ENST00000581068 QPCTQ16769 361 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
SKA2-206ENST00000581068 KBTBD12Q3ZCT8 623 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 CTAGE3PQ8IX95 158 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 NDUFAF2Q8N183 169 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 KRT222Q8N1A0 295 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 SLC44A3Q8N4M1 653 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 OR2A12Q8NGT7 310 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 BLOC1S5Q8TDH9 187 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 PIH1D2Q8WWB5 315 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 CHFRQ96EP1 664 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 MFSD3Q96ES6 412 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 CERS2Q96G23 380 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 ATP6V1G3Q96LB4 118 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 SRPK1Q96SB4 655 aaKnown RBP11.11□□□□□ -0.63
SKA2-206ENST00000581068 P2RY13Q9BPV8 354 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 SUV39H2Q9H5I1 410 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 ZDHHC6Q9H6R6 413 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 C8orf33Q9H7E9 229 aaPredicted RBP11.11□□□□□ -0.63
SKA2-206ENST00000581068 KCNK12Q9HB15 430 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 HACD3Q9P035 362 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 LGALS13Q9UHV8 139 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 RIMKLBQ9ULI2 386 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 IKBKGQ9Y6K9 419 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
SKA2-206ENST00000581068 EDDM13A0A1B0GTR0 161 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 MROH6A6NGR9 719 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 PIGNO95427 931 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 C1QAP02745 245 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 INHBAP08476 426 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 GCAP28676 217 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 OAS2P29728 719 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 ATP5DP30049 168 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 GKP32189 559 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 SLC8A1P32418 973 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 ZNF234Q14588 700 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 EFTUD2Q15029 972 aaKnown RBP eCLIP11.1□□□□□ -0.638e-12■■■■□ 22.2
SKA2-206ENST00000581068 TAF1AQ15573 450 aaPredicted RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 SKIDA1Q1XH10 827 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 TTMPQ5BVD1 217 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 HABP4Q5JVS0 413 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 NAIF1Q69YI7 327 aaPredicted RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 PDPK2PQ6A1A2 396 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 KIAA0930Q6ICG6 404 aaPredicted RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 ESRP1Q6NXG1 681 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 TRMT10BQ6PF06 316 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 GDPD4Q6W3E5 623 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 MARK2Q7KZI7 788 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 SLC26A11Q86WA9 606 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 LRRC6Q86X45 466 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 PPM1NQ8N819 430 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 CHST14Q8NCH0 376 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 STYXQ8WUJ0 223 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 SLC44A1Q8WWI5 657 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 DNASE1L2Q92874 299 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 PTPRN2Q92932 1015 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 PEX13Q92968 403 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 MRRFQ96E11 262 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 LRIG1Q96JA1 1093 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 PAFAH2Q99487 392 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 DHRS4Q9BTZ2 278 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 PPANQ9NQ55 473 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 SMYD2Q9NRG4 433 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 TREX1Q9NSU2 369 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 C20orf96Q9NUD7 363 aaPredicted RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.1□□□□□ -0.63
SKA2-206ENST00000581068 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 THAP10Q9P2Z0 257 aaPredicted RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 SUN2Q9UH99 717 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 PHTF1Q9UMS5 762 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 SPO11Q9Y5K1 396 aa11.1□□□□□ -0.63
SKA2-206ENST00000581068 RANBP2P49792 3224 aaKnown RBP11.1□□□□□ -0.63
SKA2-206ENST00000581068 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 CCDC78A2IDD5 438 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 C2orf81A6NN90 581 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 CXorf49A8MYA2 514 aaPredicted RBP11.09□□□□□ -0.63
SKA2-206ENST00000581068 SPECC1L-ADORA2AF8WAN1 911 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 NPC1O15118 1278 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 LDB2O43679 373 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 RNF40O75150 1001 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 PIRTP0C851 137 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 ERVK-10P10266 1014 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 HNRNPLP14866 589 aaKnown RBP eCLIP11.09□□□□□ -0.63
SKA2-206ENST00000581068 ABL2P42684 1182 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 SOX9P48436 509 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 SERPINB9P50453 376 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 POLR2LP62875 67 aaKnown RBP11.09□□□□□ -0.63
SKA2-206ENST00000581068 PDE1BQ01064 536 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 CNGA3Q16281 694 aa11.09□□□□□ -0.63
SKA2-206ENST00000581068 HNRNPA1L2Q32P51 320 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms