RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 SH3BP5O60239 455 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 CER1O95813 267 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 TUBB4AP04350 444 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ATP1A1P05023 1023 aaKnown RBP9.98□□□□□ -0.81
GGA3-209ENST00000580646 RBP3P10745 1247 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 SERPINA4P29622 427 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 DRD3P35462 400 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 RGRP47804 291 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 GRIA4P48058 902 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 DNA2P51530 1060 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 CCR5P51681 352 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 METAP1P53582 386 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 EIF3EP60228 445 aaKnown RBP9.98□□□□□ -0.81
GGA3-209ENST00000580646 GNG11P61952 73 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 SHC2P98077 582 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 LLGL1Q15334 1064 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 KIF19Q2TAC6 998 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 HLA-BQ31612 363 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ZNF805Q5CZA5 627 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ARSIQ5FYB1 569 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ATXN7L2Q5T6C5 722 aaPredicted RBP9.98□□□□□ -0.81
GGA3-209ENST00000580646 PAPD7Q5XG87 772 aaKnown RBP9.98□□□□□ -0.81
GGA3-209ENST00000580646 GDPD4Q6W3E5 623 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ZC3H18Q86VM9 953 aaKnown RBP9.98□□□□□ -0.81
GGA3-209ENST00000580646 PGBD5Q8N414 524 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 RYBPQ8N488 228 aaPredicted RBP9.98□□□□□ -0.81
GGA3-209ENST00000580646 SLC35B2Q8TB61 432 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ACTRT1Q8TDG2 376 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 RAB7BQ96AH8 199 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ECHDC3Q96DC8 303 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 TEKT5Q96M29 485 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 OSBPL9Q96SU4 736 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ZDHHC6Q9H6R6 413 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 YY1AP1Q9H869 796 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 EBF2Q9HAK2 575 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 IL21RQ9HBE5 538 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 DYRK4Q9NR20 520 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 RBM22Q9NW64 420 aaKnown RBP eCLIP9.98□□□□□ -0.81
GGA3-209ENST00000580646 TRHDEQ9UKU6 1024 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 ANKRD6Q9Y2G4 727 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 SNX11Q9Y5W9 270 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 FASNP49327 2511 aaKnown RBP9.98□□□□□ -0.81
GGA3-209ENST00000580646 ASPMQ8IZT6 3477 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 PLXNA2O75051 1894 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 CACNA1EQ15878 2313 aa9.98□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3DA0A087WVF3 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3IA0A087WXS9 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3EA0A087X179 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3KA0A087X1G2 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 SPAARA0A1B0GVQ0 90 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3FA6NER0 549 aaPredicted RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3LB9A6J9 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 H7C0C1 242 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 KCNK1O00180 336 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 PLK4O00444 970 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 KPNA3O00505 521 aaPredicted RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 TRAFD1O14545 582 aaPredicted RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 HTRA2O43464 458 aaPredicted RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 PLRG1O43660 514 aaKnown RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 AP1G1O43747 822 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 CEP104O60308 925 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 NEBLO76041 1014 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 JCHAINP01591 159 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 FGGP02679 453 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 HLA-DQB2P05538 268 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3HP0C7X1 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 ZNF883P0CG24 379 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 PTPN3P26045 913 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 STIP1P31948 543 aaKnown RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 ATP5OP48047 213 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 SCNN1BP51168 640 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 NEK3P51956 506 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 ADPRHP54922 357 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 ETF1P62495 437 aaKnown RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 RACK1P63244 317 aaKnown RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 FAM193AP78312 1265 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 SIM1P81133 766 aaPredicted RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 BCL2L1Q07817 233 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 WASHC5Q12768 1159 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 FOXC1Q12948 553 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 ZBTB17Q13105 803 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 SIX1Q15475 284 aaPredicted RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 OASLQ15646 514 aaKnown RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 CCNG2Q16589 344 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 POM121L1PQ3SYA9 428 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 AGBL4Q5VU57 503 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3GQ6DHY5 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3CQ6IPX1 549 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 NEK5Q6P3R8 708 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 BRAT1Q6PJG6 821 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 ERN2Q76MJ5 926 aaKnown RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 ADAT2Q7Z6V5 191 aaKnown RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 TBC1D3Q8IZP1 549 aaPredicted RBP9.97□□□□□ -0.81
GGA3-209ENST00000580646 CNTD1Q8N815 330 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 ARRDC2Q8TBH0 407 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 GRIN3AQ8TCU5 1115 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 COL26A1Q96A83 441 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 RTP4Q96DX8 246 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 EXOC2Q96KP1 924 aa9.97□□□□□ -0.81
GGA3-209ENST00000580646 CAMK1GQ96NX5 476 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms