RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 PPP1R12AO14974 1030 aaPredicted RBP10.97□□□□□ -0.65
NDEL1-208ENST00000580237 FFAR2O15552 330 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 TRIM16O95361 564 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 LCA5LO95447 670 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 PEX11BO96011 259 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 PCCBP05166 539 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 KRT10P13645 584 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 ZFXP17010 805 aaPredicted RBP10.97□□□□□ -0.65
NDEL1-208ENST00000580237 CDC25BP30305 580 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 IGFALSP35858 605 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 LIG3P49916 1009 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 EPHB1P54762 984 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 HADHBP55084 474 aaKnown RBP10.97□□□□□ -0.65
NDEL1-208ENST00000580237 AP1B1Q10567 949 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 PTK2BQ14289 1009 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 LRRC14Q15048 493 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 TCEAL1Q15170 157 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 IRF4Q15306 451 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 TMEM52BQ4KMG9 183 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 RALGPS1Q5JS13 557 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 C11orf63Q6NUN7 778 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 USP45Q70EL2 814 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 ZSWIM9Q86XI8 627 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 VSIG1Q86XK7 387 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 DCP2Q8IU60 420 aaKnown RBP10.97□□□□□ -0.65
NDEL1-208ENST00000580237 CCDC13Q8IYE1 715 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 SLC22A18ASQ8N1D0 253 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 TXLNBQ8N3L3 684 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 PGBD5Q8N414 524 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 EID2Q8N6I1 236 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 PQLC3Q8N755 202 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 SAP25Q8TEE9 199 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 ASB12Q8WXK4 309 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 VOPP1Q96AW1 172 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 HDAC11Q96DB2 347 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 ECHDC3Q96DC8 303 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 CNDP2Q96KP4 475 aaKnown RBP10.97□□□□□ -0.65
NDEL1-208ENST00000580237 BAG1Q99933 345 aaPredicted RBP10.97□□□□□ -0.65
NDEL1-208ENST00000580237 SEMA3CQ99985 751 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 NOD2Q9HC29 1040 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 TFR2Q9UP52 801 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 PCDHGC4Q9Y5F7 938 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 HS3ST3A1Q9Y663 406 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 EPN1Q9Y6I3 576 aaPredicted RBP10.97□□□□□ -0.65
NDEL1-208ENST00000580237 A0A0A6YYK5 440 aaPredicted RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 A8MX80 341 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 MATN3O15232 486 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 TNFSF14O43557 240 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 HYAL3O43820 417 aaPredicted RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 CBFA2T3O75081 653 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 LDOC1O95751 146 aaPredicted RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 ALPPL2P10696 532 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 CYP2A6P11509 494 aaPredicted RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 CCNB1P14635 433 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 CR2P20023 1033 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 SPINK2P20155 84 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 CCNCP24863 283 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 RXRGP48443 463 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 HNRNPKP61978 463 aaKnown RBP eCLIP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 DSC2Q02487 901 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 TRAF2Q12933 501 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 ARHGEF7Q14155 803 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 TFDP2Q14188 446 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 ACOX1Q15067 660 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 PDK1Q15118 436 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 SHBQ15464 509 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 ZNF542PQ5EBM4 170 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 ARMC12Q5T9G4 340 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 KAZNQ674X7 775 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 DENND2CQ68D51 928 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 DPPA4Q7L190 304 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 GLRX5Q86SX6 157 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 NDUFAF2Q8N183 169 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 PLD5Q8N7P1 536 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 PNPLA1Q8N8W4 532 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 ACRBPQ8NEB7 543 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 BAHD1Q8TBE0 780 aaPredicted RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 LRRN4Q8WUT4 740 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 RBM41Q96IZ5 413 aaKnown RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 LENG8Q96PV6 779 aaPredicted RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 KLF6Q99612 283 aaPredicted RBP10.96□□□□□ -0.65
NDEL1-208ENST00000580237 RBM22Q9NW64 420 aaKnown RBP eCLIP10.96□□□□□ -0.653e-6■■□□□ 11.9
NDEL1-208ENST00000580237 DTLQ9NZJ0 730 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 SEPT10Q9P0V9 454 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 IMPACTQ9P2X3 320 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 B4GALT6Q9UBX8 382 aa10.96□□□□□ -0.65
NDEL1-208ENST00000580237 ACACBO00763 2458 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 SPTY2D1-AS1A0A0U1RR47 76 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 MACROD2A1Z1Q3 448 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 GOLGA6CA6NDK9 693 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 GOLGA6BA6NDN3 693 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 NEMP2A6NFY4 417 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 KCNK1O00180 336 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 TRAFD1O14545 582 aaPredicted RBP10.95□□□□□ -0.66
NDEL1-208ENST00000580237 ENC1O14682 589 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 PIAS2O75928 621 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 HLA-DQB2P05538 268 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 ATXN1LP0C7T5 689 aaKnown RBP10.95□□□□□ -0.66
NDEL1-208ENST00000580237 GOLGA6DP0CG33 693 aa10.95□□□□□ -0.66
NDEL1-208ENST00000580237 NME1P15531 152 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms