RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SIRT3Q9NTG7 399 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 FBXO28Q9NVF7 368 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 DKK3Q9UBP4 350 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CTNNA3Q9UI47 895 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ANAPC2Q9UJX6 822 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 UBE2J1Q9Y385 318 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PTRH2Q9Y3E5 179 aaKnown RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TRIM17Q9Y577 477 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PCDHB7Q9Y5E2 793 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 RAD54BQ9Y620 910 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ABCA8O94911 1581 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 NEURL4Q96JN8 1562 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ZMYM3Q14202 1370 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF644Q9H582 1327 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MYO3AQ8NEV4 1616 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 TRBC2A0A5B9 178 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 A4D1N5 150 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 OR2A25A4D2G3 310 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 AGAP5A6NIR3 686 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 BTBD18B2RXH4 712 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 KCNJ18B7U540 433 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 SYNMO15061 1565 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 DCLK1O15075 740 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 SCAMP1O15126 338 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CTIFO43310 598 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 PROM1O43490 865 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 RTN2O75298 545 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 PSMD10O75832 226 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 WDR47O94967 919 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 OLFM2O95897 454 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 TPOP07202 933 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 HEXBP07686 556 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CD19P15391 556 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CASTP20810 708 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 TCEA1P23193 301 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 NTSR1P30989 418 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MTHFRP42898 656 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 NT5C2P49902 561 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 GPC3P51654 580 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 BMXP51813 675 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 TKTL1P51854 596 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 LILRA4P59901 499 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 ARF5P84085 180 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 EFNB1P98172 346 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 NHLH2Q02577 135 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 C17orf67Q0P5P2 114 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 FHL3Q13643 280 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CBFBQ13951 182 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 E2F2Q14209 437 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 RCN2Q14257 317 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 FRG1Q14331 258 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 KCNJ12Q14500 433 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 LASP1Q14847 261 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 ACOX1Q15067 660 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 PPP2R5BQ15173 497 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 AAK1Q2M2I8 961 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 WSCD2Q2TBF2 565 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 ZIK1Q3SY52 487 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CERCAMQ5T4B2 595 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 GKAP1Q5VSY0 366 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MTHFD1LQ6UB35 978 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 OLFM4Q6UX06 510 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 PARS2Q7L3T8 475 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 ADCK1Q86TW2 530 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 KBTBD6Q86V97 674 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 HDDC3Q8N4P3 179 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF540Q8NDQ6 660 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MCUQ8NE86 351 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 DENND6BQ8NEG7 585 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 PSMA8Q8TAA3 256 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 ACTRT2Q8TDY3 377 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 DUSP19Q8WTR2 217 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 SYAP1Q96A49 352 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 TMCO6Q96DC7 493 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 TRIM44Q96DX7 344 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 RNFT2Q96EX2 444 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CDCA5Q96FF9 252 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 PDLIM5Q96HC4 596 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CFAP53Q96M91 514 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 KLHL32Q96NJ5 620 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 WDFY2Q96P53 400 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 SLC25A23Q9BV35 468 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CFAP74Q9C0B2 1584 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MRPL44Q9H9J2 332 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 LIN28AQ9H9Z2 209 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 C17orf75Q9HAS0 396 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 GBA2Q9HCG7 927 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 IL17RBQ9NRM6 502 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 ABCB8Q9NUT2 735 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 THAP1Q9NVV9 213 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CNTLNQ9NXG0 1405 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MCM9Q9NXL9 1143 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 IL1RAPL1Q9NZN1 696 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 MDFICQ9P1T7 246 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 LEF1Q9UJU2 399 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 RAB21Q9UL25 225 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 TRPC5Q9UL62 973 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 NENFQ9UMX5 172 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 SLC12A4Q9UP95 1085 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms