RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 FFAR2O15552 330 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 MMP20O60882 483 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 SOCS5O75159 536 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 PALMO75781 387 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 NFKBIAP25963 317 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 TRIM23P36406 574 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 EIF4A3P38919 411 aaKnown RBP14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 PBX1P40424 430 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 ABCG1P45844 678 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 HK3P52790 923 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 PPARDQ03181 441 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 ELOCQ15369 112 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 WSCD2Q2TBF2 565 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 VPS36Q86VN1 386 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 MARCH9Q86YJ5 346 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 PHACTR4Q8IZ21 702 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 SCG3Q8WXD2 468 aaKnown RBP14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 FATE1Q969F0 183 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 NAP1L5Q96NT1 182 aaPredicted RBP14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 PEBP4Q96S96 227 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 KCTD15Q96SI1 283 aaPredicted RBP14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 PCDH12Q9NPG4 1184 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 CWC15Q9P013 229 aaKnown RBP14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 LCMT1Q9UIC8 334 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 PCDHGA8Q9Y5G5 932 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 AK5Q9Y6K8 562 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 HELZ2Q9BYK8 2649 aaKnown RBP14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 H3BRJ5 948 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 DAPK3O43293 454 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 HTRA2O43464 458 aaPredicted RBP14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 BUB1BO60566 1050 aaPredicted RBP14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 RASGRP1O95267 797 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 C6P13671 934 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 KELP23276 732 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 KIAA1024LP59773 190 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 TPM4P67936 248 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 NFATC4Q14934 902 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 NR0B2Q15466 257 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 CA9Q16790 459 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 TPRG1LQ5T0D9 272 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 CFAP58Q5T655 872 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 E4F1Q66K89 784 aaPredicted RBP14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 HGSNATQ68CP4 663 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 LEKR1Q6ZMV7 388 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 LRRC69Q6ZNQ3 347 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 RAVER1Q8IY67 606 aaKnown RBP14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 TSEN2Q8NCE0 465 aaKnown RBP14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 FAM71BQ8TC56 605 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 IFI44Q8TCB0 444 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 HIC2Q96JB3 615 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 LRRC61Q9BV99 259 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 CINPQ9BW66 212 aaPredicted RBP14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 ABCG4Q9H172 646 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 POLR1BQ9H9Y6 1135 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 SP110Q9HB58 689 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 COL6A6A6NMZ7 2263 aa14.6□□□□□ -0.07
SMARCE1-213ENST00000578044 PDE2AO00408 941 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 INSIG1O15503 277 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 TLX3O43711 291 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 BRINP1O60477 761 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 NEBLO76041 1014 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ANXA6P08133 673 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 PNLIPP16233 465 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 CR2P20023 1033 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 TEAD1P28347 426 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 SERPINB6P35237 376 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ARL4AP40617 200 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 LIG3P49916 1009 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ZBED6P86452 979 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 BCL2L1Q07817 233 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 IRF4Q15306 451 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ISXQ2M1V0 245 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ZNF542PQ5EBM4 170 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 PRRT3Q5FWE3 981 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ESRP1Q6NXG1 681 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 DPPA4Q7L190 304 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 POLNQ7Z5Q5 900 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 CAMK1DQ8IU85 385 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 CBARPQ8N350 705 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 MAPK15Q8TD08 544 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 LMX1AQ8TE12 382 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ZNF653Q96CK0 615 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 RBM15Q96T37 977 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 APOOQ9BUR5 198 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 PRORYQ9H606 182 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 MBNL1Q9NR56 388 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 PCSK1NQ9UHG2 260 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 IP6K2Q9UHH9 426 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 AMACRQ9UHK6 382 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 CAPN11Q9UMQ6 739 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 PPIL1Q9Y3C6 166 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 ATMQ13315 3056 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 KIF26BQ2KJY2 2108 aa14.59□□□□□ -0.07
SMARCE1-213ENST00000578044 TMCO5BA8MYB1 307 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 TMX2-CTNND1H3BSU7 103 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 PSMD11O00231 422 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 YY2O15391 372 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 GCATO75600 419 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 PIGNO95427 931 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms