RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 CSNK1DP48730 415 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PEX5P50542 639 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PCBP4P57723 403 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TLE3Q04726 772 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CCDC173Q0VFZ6 552 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 AGERQ15109 404 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PERM1Q5SV97 790 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CFAP58Q5T655 872 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 FAXCQ5TGI0 409 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ERAP2Q6P179 960 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SPACA3Q8IXA5 215 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 HIC2Q96JB3 615 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ZNF578Q96N58 590 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 UBL7Q96S82 380 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 POLR1BQ9H9Y6 1135 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 AIPL1Q9NZN9 384 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CFAP46Q8IYW2 2715 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 A0A1W2PQC6 194 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DDX3XO00571 662 aaKnown RBP eCLIP16.76■□□□□ 0.271e-8■■■□□ 15.4
CDK5RAP3-206ENST00000578018 YY2O15391 372 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PRPSAP2O60256 369 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LRCH4O75427 683 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PALMO75781 387 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RNF8O76064 485 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 FTLP02792 175 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PRKCGP05129 697 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ANXA6P08133 673 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GZMAP12544 262 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SERPINA4P29622 427 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RPIAP49247 311 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LIG3P49916 1009 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 HK3P52790 923 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NFATC4Q14934 902 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ALG11Q2TAA5 492 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PPP6R3Q5H9R7 873 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CRTC1Q6UUV9 634 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ARHGAP36Q6ZRI8 547 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SRLQ86TD4 932 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PSTKQ8IV42 348 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 FSTL5Q8N475 847 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TPCN2Q8NHX9 752 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GLMNQ92990 594 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NAT6Q93015 286 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZNF653Q96CK0 615 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ECHDC3Q96DC8 303 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 FCRL3Q96P31 734 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 FUCA2Q9BTY2 467 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ATP13A3Q9H7F0 1226 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SP110Q9HB58 689 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ASCL3Q9NQ33 180 aa16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CNOT8Q9UFF9 292 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-206ENST00000578018 A0A1W2PNU3 283 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TMEM110-MUSTN1A8MSY1 372 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CASC3O15234 703 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DAPK3O43293 454 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TCEA3O75764 348 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 BLKP51451 505 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ERVPABLB-1P60509 514 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 IL10RBQ08334 325 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RALGDSQ12967 914 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DPYSQ14117 519 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 INPP5AQ14642 412 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RBM44Q6ZP01 1051 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NYAP1Q6ZVC0 841 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 HID1Q8IV36 788 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LSMEM2Q8N112 164 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZNF248Q8NDW4 579 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PCDH19Q8TAB3 1148 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ATXN7L3BQ96GX2 97 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LGMNQ99538 433 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 APOOQ9BUR5 198 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CINPQ9BW66 212 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 OR1A2Q9Y585 309 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ENTPD2Q9Y5L3 495 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SCINQ9Y6U3 715 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 AHCTF1Q8WYP5 2266 aa16.75■□□□□ 0.27
CDK5RAP3-206ENST00000578018 A0A1B0GTH6 734 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SMTNL1A8MU46 457 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DFFAO00273 331 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RASGRP1O95267 797 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PCCBP05166 539 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 HTR1BP28222 390 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 HCAR3P49019 387 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZNF135P52742 658 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PDX1P52945 283 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 KLHL30Q0D2K2 578 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 MTM1Q13496 603 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RFTN1Q14699 578 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ELOCQ15369 112 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 FILIP1LQ4L180 1135 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 C3orf38Q5JPI3 329 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 KCTD16Q68DU8 428 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 IGF2-ASQ6U949 168 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TP53INP2Q8IXH6 220 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ARL10Q8N8L6 244 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 KYQ8NBH2 561 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TSACCQ96A04 125 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GRAMD1AQ96CP6 724 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PDXPQ96GD0 296 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NSMCE3Q96MG7 304 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms