RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 GNA12Q03113 381 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MGAT5Q09328 741 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MMRN1Q13201 1228 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GPR17Q13304 367 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 EIF4HQ15056 248 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PLA2G4EQ3MJ16 856 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HSP90AA5PQ58FG0 334 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 STXBP5Q5T5C0 1151 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PDPK2PQ6A1A2 396 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NEK5Q6P3R8 708 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RFWD3Q6PCD5 774 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SCIMPQ6UWF3 145 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MACC1Q6ZN28 852 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RNF44Q7L0R7 432 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 R3HCC1LQ7Z5L2 792 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 AMZ2Q86W34 360 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM228AQ86W67 206 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 LRRC6Q86X45 466 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GPSM1Q86YR5 675 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 UBALD2Q8IYN6 164 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 UNC5BQ8IZJ1 945 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP4Z2PQ8N1L4 340 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HORMAD2Q8N7B1 307 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 OR10H5Q8NGA6 315 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 OR2W6PQ8NHA6 318 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CEP76Q8TAP6 659 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 METTL6Q8TCB7 284 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PRR11Q96HE9 360 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SGSM3Q96HU1 749 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SUSD3Q96L08 255 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C12orf66Q96MD2 445 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SPATA5L1Q9BVQ7 753 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CCDC90BQ9GZT6 254 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PCBD2Q9H0N5 130 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CARD9Q9H257 536 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 UBE2ZQ9H832 354 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TXNRD2Q9NNW7 524 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ZC4H2Q9NQZ6 224 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GDE1Q9NZC3 331 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RARRES3Q9UL19 164 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DUSP12Q9UNI6 340 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MRPL42Q9Y6G3 142 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 COL1A1P02452 1464 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 COL14A1Q05707 1796 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GLYATL1P3A0A0U1RQE8 302 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM227AF5H4B4 570 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 WNT9AO14904 365 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 AKAP8O43823 692 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PHF2O75151 1096 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SEC22BO75396 215 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RPP40O75818 363 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TRAPPC6AO75865 159 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 VAPBO95292 243 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CHGBP05060 677 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CD63P08962 238 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HBQ1P09105 142 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CCNB1P14635 433 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 H2AFXP16104 143 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ATP4AP20648 1035 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FGFR3P22607 806 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 IL12BP29460 328 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SPAM1P38567 509 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 LILRA4P59901 499 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 STXBP1P61764 594 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C1DQ13901 141 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PON2Q15165 354 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PTPN21Q16825 1174 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MANEAQ5SRI9 462 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 LY6G5CQ5SRR4 150 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TRIM40Q6P9F5 258 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 EMBQ6PCB8 327 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC30A9Q6PML9 568 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 STRA8Q7Z7C7 330 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GATAD2AQ86YP4 633 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CDYL2Q8N8U2 506 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM161BQ8NDZ6 487 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ADCY4Q8NFM4 1077 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RNASE11Q8TAA1 199 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PIP4K2CQ8TBX8 421 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SELENOMQ8WWX9 145 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SMPDL3BQ92485 455 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SYN2Q92777 582 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CLP1Q92989 425 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NAT6Q93015 286 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RPL10LQ96L21 214 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CCT7Q99832 543 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 KLHL25Q9H0H3 589 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TNKS2Q9H2K2 1166 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CCDC134Q9H6E4 229 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 BPIFA1Q9NP55 256 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SDHAF3Q9NRP4 125 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SERINC1Q9NRX5 453 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 EXD2Q9NVH0 621 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 IL36AQ9UHA7 158 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 BAIAP2L1Q9UHR4 511 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TMCO1Q9UM00 188 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GPR34Q9UPC5 381 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CLCA3PQ9Y6N3 262 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MORC2Q9Y6X9 1032 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms