RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 C6P13671 934 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 MAN1A1P33908 653 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 CDH6P55285 790 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 RALGDSQ12967 914 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 EIF2B5Q13144 721 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 HADHQ16836 314 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 WSCD2Q2TBF2 565 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 RALGPS1Q5JS13 557 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 ERAP2Q6P179 960 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 H2AFVQ71UI9 128 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 ZNF548Q8NEK5 533 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 CTNNBL1Q8WYA6 563 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 MGME1Q9BQP7 344 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 ZNF670Q9BS34 389 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 DUSP23Q9BVJ7 150 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 MBNL1Q9NR56 388 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 ABHD10Q9NUJ1 306 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 RP1P56715 2156 aa12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 URB1O60287 2271 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-206ENST00000577578 LY6G6EA0A0G2JKS1 128 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 A0A1W2PQ67 120 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 H3BM21 787 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 K7ESM1 405 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 TPP1O14773 563 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 MFAP3LO75121 409 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 SOCS5O75159 536 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 TMEM253P0C7T8 217 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 CKMT1AP12532 417 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 LIG3P49916 1009 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 PEX5P50542 639 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 SCNN1BP51168 640 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 THOP1P52888 689 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 POLR2LP62875 67 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 DPYSL3Q14195 570 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 PTK2BQ14289 1009 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 LRRC14Q15048 493 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 IRF4Q15306 451 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 CCDC157Q569K6 752 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 ZNF542PQ5EBM4 170 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 MACC1Q6ZN28 852 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 PGBD5Q8N414 524 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 ATPAF2Q8N5M1 289 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 FATE1Q969F0 183 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 USP29Q9HBJ7 922 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 CTTNBP2NLQ9P2B4 639 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 PNMA8BQ9ULN7 279 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 U3KQA8 63 aa12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-206ENST00000577578 FAM149AA5PLN7 773 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 TRABD2BA6NFA1 517 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 TMEM110-MUSTN1A8MSY1 372 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 FFAR2O15552 330 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 MTA2O94776 668 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 GP1BAP07359 652 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 KRT7P08729 469 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 ALPPL2P10696 532 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 JUNDP17535 347 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 HNF1BP35680 557 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 TAS2R40P59535 323 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 GALNT2Q10471 571 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 KRT81Q14533 505 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 ZNF235Q14590 738 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 PDK2Q15119 407 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 ATP13A4Q4VNC1 1196 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 HS1BP3Q53T59 392 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 NCBP2-AS2Q69YL0 99 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 ZCCHC8Q6NZY4 707 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 DPPA4Q7L190 304 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 MARCH9Q86YJ5 346 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 PDCD7Q8N8D1 485 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 PCDH19Q8TAB3 1148 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 BTN2A2Q8WVV5 523 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 APOLD1Q96LR9 279 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 CHP1Q99653 195 aa12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 CCDC86Q9H6F5 360 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 ZNHIT6Q9NWK9 470 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-206ENST00000577578 ZNF487B1APH4 448 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 AQP9O43315 295 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 MFSD11O43934 449 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 AKR1B10O60218 316 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 NEBLO76041 1014 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 PRKCGP05129 697 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 GM2AP17900 193 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 GARSP41250 739 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 MMP13P45452 471 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 E2F1Q01094 437 aa12.51□□□□□ -0.41
CSNK1D-206ENST00000577578 INSM1Q01101 510 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms