RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TIMP2P16035 220 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 PON1P27169 355 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 CYP4F2P78329 520 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 KCNAB2Q13303 367 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 CLCA4Q14CN2 919 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 AGERQ15109 404 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
COPS3-214ENST00000577246 ARTNQ5T4W7 220 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 NLRP14Q86W24 1093 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 SLITRK4Q8IW52 837 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 OR56A4Q8NGH8 313 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 HTR3CQ8WXA8 447 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 TBC1D31Q96DN5 1066 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 ANAPC2Q9UJX6 822 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 DNAJC12Q9UKB3 198 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 OR1A2Q9Y585 309 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 PTPN13Q12923 2485 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 GOLGA8SH3BPF8 625 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 FOXN3O00409 490 aaPredicted RBP13.46□□□□□ -0.25
COPS3-214ENST00000577246 TNFRSF10CO14798 259 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 PCCBP05166 539 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 BMP6P22004 513 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 ADRA1BP35368 520 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 CLCN1P35523 988 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 ETV5P41161 510 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 CCR10P46092 362 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 POLE2P56282 527 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 KIAA1024LP59773 190 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 ATP11AP98196 1134 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 SERINC3Q13530 473 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 HLTFQ14527 1009 aaKnown RBP eCLIP13.46□□□□□ -0.25
COPS3-214ENST00000577246 MANEALQ5VSG8 457 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 BRAT1Q6PJG6 821 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 FAM71AQ8IYT1 594 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 IL22RA1Q8N6P7 574 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 HMCESQ96FZ2 354 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 DPEP2Q9H4A9 486 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 NDFIP2Q9NV92 336 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 TMEM59LQ9UK28 342 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 COQ6Q9Y2Z9 468 aa13.46□□□□□ -0.25
COPS3-214ENST00000577246 RP1P56715 2156 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 CFAP69A5D8W1 941 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 B4DGG1 531 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
COPS3-214ENST00000577246 BIN1O00499 593 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 CAPN5O15484 640 aaPredicted RBP13.45□□□□□ -0.26
COPS3-214ENST00000577246 CYP11B1P15538 503 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 WT1P19544 449 aaPredicted RBP13.45□□□□□ -0.26
COPS3-214ENST00000577246 SDC4P31431 198 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 CASRP41180 1078 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 APBA1Q02410 837 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 BIRC2Q13490 618 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 PEX6Q13608 980 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 UGP2Q16851 508 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 SPECC1LQ69YQ0 1117 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 LEKR1Q6ZMV7 388 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 DNAAF5Q86Y56 855 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 PTRH1Q86Y79 214 aaKnown RBP13.45□□□□□ -0.26
COPS3-214ENST00000577246 VOPP1Q96AW1 172 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 ZNF641Q96N77 438 aaPredicted RBP13.45□□□□□ -0.26
COPS3-214ENST00000577246 TAAR9Q96RI9 348 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 SLC12A9Q9BXP2 914 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 CDH19Q9H159 772 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 EPN3Q9H201 632 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 PCDH12Q9NPG4 1184 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 RWDD2AQ9UIY3 292 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 DAAM1Q9Y4D1 1078 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 PCDHGA3Q9Y5H0 932 aa13.45□□□□□ -0.26
COPS3-214ENST00000577246 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 RHPN2P1A8MT19 583 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 ZNF891A8MT65 544 aaPredicted RBP13.44□□□□□ -0.26
COPS3-214ENST00000577246 AGRPO00253 132 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 LRIG2O94898 1065 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 PLEKP08567 350 aaPredicted RBP13.44□□□□□ -0.26
COPS3-214ENST00000577246 HOXC4P09017 264 aaPredicted RBP13.44□□□□□ -0.26
COPS3-214ENST00000577246 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
COPS3-214ENST00000577246 ITIH2P19823 946 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 CR2P20023 1033 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 LIG3P49916 1009 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 YBEYP58557 167 aaPredicted RBP13.44□□□□□ -0.26
COPS3-214ENST00000577246 FOXK1P85037 733 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 TRA2AQ13595 282 aaKnown RBP eCLIP13.44□□□□□ -0.26
COPS3-214ENST00000577246 C16orf72Q14CZ0 275 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 EFHC2Q5JST6 749 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 ASPSCR1Q9BZE9 553 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 SEMA6CQ9H3T2 930 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 SUV39H2Q9H5I1 410 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 DONSONQ9NYP3 566 aa13.44□□□□□ -0.26
COPS3-214ENST00000577246 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
COPS3-214ENST00000577246 MMP12P39900 470 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 STAT1P42224 750 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 MTIF2P46199 727 aaKnown RBP13.43□□□□□ -0.26
COPS3-214ENST00000577246 B4GALNT1Q00973 533 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 RAPGEF1Q13905 1077 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 CDO1Q16878 200 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 AMZ1Q400G9 498 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 PARP15Q460N3 678 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 TRNP1Q6NT89 227 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms