RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 KNL1Q8NG31 2342 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 DNAH14Q0VDD8 3507 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 TMEM131Q92545 1883 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 ZNF487B1APH4 448 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 H3BM21 787 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
SMG6-220ENST00000576218 RAD51BO15315 384 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 SPINT1O43278 529 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 PEX11BO96011 259 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 C6P13671 934 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 CCNB1P14635 433 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 MMP12P39900 470 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 LIG3P49916 1009 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 HADHBP55084 474 aaKnown RBP15.36■□□□□ 0.05
SMG6-220ENST00000576218 TFDP2Q14188 446 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 PTK2BQ14289 1009 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 LRRC14Q15048 493 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 PDK1Q15118 436 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 TMEM52BQ4KMG9 183 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 ARMC12Q5T9G4 340 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 CCDC181Q5TID7 509 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 DENND2CQ68D51 928 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 RAD9BQ6WBX8 426 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 BZW1Q7L1Q6 419 aaKnown RBP15.36■□□□□ 0.05
SMG6-220ENST00000576218 ABI3BPQ7Z7G0 1075 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 PGBD5Q8N414 524 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 LRRN4Q8WUT4 740 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 ASB12Q8WXK4 309 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 HDAC11Q96DB2 347 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 LENG8Q96PV6 779 aaPredicted RBP15.36■□□□□ 0.05
SMG6-220ENST00000576218 SEMA3CQ99985 751 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 DTLQ9NZJ0 730 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 ANGPTL2Q9UKU9 493 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 BTBD3Q9Y2F9 522 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 SHROOM3Q8TF72 1996 aa15.36■□□□□ 0.05
SMG6-220ENST00000576218 TP53BP1Q12888 1972 aaPredicted RBP15.35■□□□□ 0.05
SMG6-220ENST00000576218 POM121BA6NF01 834 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 A8MX80 341 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 PCCBP05166 539 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
SMG6-220ENST00000576218 CYP2A6P11509 494 aaPredicted RBP15.35■□□□□ 0.05
SMG6-220ENST00000576218 VAV2P52735 878 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 GSDMDP57764 484 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 ARHGEF7Q14155 803 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 ACOX1Q15067 660 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 LLGL1Q15334 1064 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 MFSD7Q6UXD7 560 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 USP45Q70EL2 814 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 PARGQ86W56 976 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 ZSWIM9Q86XI8 627 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 EID2Q8N6I1 236 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
SMG6-220ENST00000576218 RBM41Q96IZ5 413 aaKnown RBP15.35■□□□□ 0.05
SMG6-220ENST00000576218 MACROD2A1Z1Q3 448 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 C3orf70A6NLC5 250 aaPredicted RBP15.34■□□□□ 0.05
SMG6-220ENST00000576218 KCNK1O00180 336 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 ZRANB2O95218 330 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMG6-220ENST00000576218 TRIM16O95361 564 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 FTH1P19P0C7X4 201 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 ALPPL2P10696 532 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 FECHP22830 423 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 CES1P23141 567 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 CETN2P41208 172 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 RXRGP48443 463 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 KIF5AQ12840 1032 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 TRAF2Q12933 501 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 BNIP3Q12983 259 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 IRF4Q15306 451 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 ZNF542PQ5EBM4 170 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 TFDP3Q5H9I0 405 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 SLC9A4Q6AI14 798 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 NPNTQ6UXI9 565 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 SPOCD1Q6ZMY3 1216 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 DPPA4Q7L190 304 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 TPCN2Q8NHX9 752 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 SAP25Q8TEE9 199 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 VOPP1Q96AW1 172 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 ECHDC3Q96DC8 303 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 CNDP2Q96KP4 475 aaKnown RBP15.34■□□□□ 0.05
SMG6-220ENST00000576218 TSGA13Q96PP4 275 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 LGMNQ99538 433 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 DESI2Q9BSY9 194 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 B4GALT6Q9UBX8 382 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 AMACRQ9UHK6 382 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 RAI2Q9Y5P3 530 aa15.34■□□□□ 0.05
SMG6-220ENST00000576218 DOCK9Q9BZ29 2069 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 GOLGA6CA6NDK9 693 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 GOLGA6BA6NDN3 693 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 TRAFD1O14545 582 aaPredicted RBP15.33■□□□□ 0.04
SMG6-220ENST00000576218 FFAR2O15552 330 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 TNFSF14O43557 240 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 CST8O60676 142 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 LDOC1O95751 146 aaPredicted RBP15.33■□□□□ 0.04
SMG6-220ENST00000576218 JCHAINP01591 159 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 HLA-DQB2P05538 268 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 GOLGA6DP0CG33 693 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 CR2P20023 1033 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 HTR1BP28222 390 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 IGFALSP35858 605 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms