RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PDK1Q15118 436 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 SLC45A4Q5BKX6 768 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF805Q5CZA5 627 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 BEND6Q5SZJ8 279 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TPRG1LQ5T0D9 272 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC181Q5TID7 509 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 KIAA0895LQ68EN5 471 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3GQ6DHY5 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 LAIR1Q6GTX8 287 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3CQ6IPX1 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 RFLNAQ6ZTI6 216 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 USP30Q70CQ3 517 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 DSG4Q86SJ6 1040 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 PRPF39Q86UA1 669 aaKnown RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 VSIG1Q86XK7 387 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 KIAA2013Q8IYS2 634 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 RGL4Q8IZJ4 473 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3Q8IZP1 549 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF567Q8N184 647 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 UBL4BQ8N7F7 174 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TMIEQ8NEW7 156 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC110Q8TBZ0 833 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TFB1MQ8WVM0 346 aaKnown RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CASKIN2Q8WXE0 1202 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 P3H4Q92791 437 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 OXNAD1Q96HP4 312 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC114Q96M63 670 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF599Q96NL3 588 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TSGA13Q96PP4 275 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 NUDCD1Q96RS6 583 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 IL12RB2Q99665 862 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 RHOXF2Q9BQY4 288 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 HDAC8Q9BY41 377 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 SUV39H2Q9H5I1 410 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 PCDH12Q9NPG4 1184 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ARGLU1Q9NWB6 273 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 PILRBQ9UKJ0 227 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 DNPEPQ9ULA0 475 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 FZD4Q9ULV1 537 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CHKBQ9Y259 395 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 RAI2Q9Y5P3 530 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ASPMQ8IZT6 3477 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 SPTBN4Q9H254 2564 aa7.96□□□□□ -1.13
CCDC40-215ENST00000576033 LNP1A1A4G5 178 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 IGLON5A6NGN9 336 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 NPIPB15A6NHN6 443 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 METTL12A8MUP2 240 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 UPK3BL1B0FP48 263 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 UPK3BL2E5RIL1 263 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 MAP2K7O14733 419 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SLC31A1O15431 190 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 KCNN4O15554 427 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 CEP104O60308 925 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 MMP20O60882 483 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 RHOBTB1O94844 696 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 PCDH8O95206 1070 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 POP4O95707 220 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 CPP00450 1065 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 PRLP01236 227 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SLC4A1P02730 911 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 CFIP05156 583 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 ZSCAN5DPP0CG00 497 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 RBP3P10745 1247 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 ZFXP17010 805 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 MX2P20592 715 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 PSMB4P28070 264 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SERPINA4P29622 427 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 CNR2P34972 360 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 MMP12P39900 470 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 IL9RQ01113 521 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 BCL2L1Q07817 233 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 HNRNPDQ14103 355 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 RFTN1Q14699 578 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 CYP1B1Q16678 543 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF284Q2VY69 593 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 PLA2G2CQ5R387 149 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 PRAMEF14Q5SWL7 426 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SEL1L2Q5TEA6 688 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 FAM46CQ5VWP2 391 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 DENND2CQ68D51 928 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 KCTD16Q68DU8 428 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 ALG1LQ6GMV1 187 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 TIGD7Q6NT04 549 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 FBXL19Q6PCT2 694 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SLC36A4Q6YBV0 504 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SLC13A5Q86YT5 568 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 EIF1ADQ8N9N8 165 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 LPCAT1Q8NF37 534 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 OR2T34Q8NGX1 318 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 C1orf216Q8TAB5 229 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 HTR3CQ8WXA8 447 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SEC14L1Q92503 715 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 ECHDC3Q96DC8 303 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 APOL2Q9BQE5 337 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 TMEM121Q9BTD3 319 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 LRRC1Q9BTT6 524 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 MLPHQ9BV36 600 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 TDRD1Q9BXT4 1180 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 POLR1EQ9GZS1 481 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SEMA4AQ9H3S1 761 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms