RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TMEM145Q8NBT3 493 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 CCNYQ8ND76 341 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 TRIM58Q8NG06 486 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 PDCD6IPQ8WUM4 868 aaKnown RBP13.37□□□□□ -0.27
RPAIN-216ENST00000575599 C16orf45Q96MC5 204 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-216ENST00000575599 MGME1Q9BQP7 344 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 SLC32A1Q9H598 525 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 PCDH12Q9NPG4 1184 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 DTLQ9NZJ0 730 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 RAD51BO15315 384 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 SH3BP5O60239 455 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 ZNF500O60304 480 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-216ENST00000575599 MMP20O60882 483 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 THEGLP0DJG4 465 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 CR2P20023 1033 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 CSRP1P21291 193 aaKnown RBP13.36□□□□□ -0.27
RPAIN-216ENST00000575599 CCT8P50990 548 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 NXPH1P58417 271 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 ELP6Q0PNE2 266 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 SLC14A1Q13336 389 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 ZNF423Q2M1K9 1284 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 KAZNQ674X7 775 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 ERAP2Q6P179 960 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 NPNTQ6UXI9 565 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 PTAR1Q7Z6K3 402 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-216ENST00000575599 VSIG1Q86XK7 387 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 CCDC50Q8IVM0 306 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 NAXDQ8IW45 347 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 HCAR2Q8TDS4 363 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 HDAC11Q96DB2 347 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 KLHDC7BQ96G42 594 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 CAMK1GQ96NX5 476 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 NUDCD1Q96RS6 583 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 NOD2Q9HC29 1040 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 ATP8A1Q9Y2Q0 1164 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPAIN-216ENST00000575599 PCDHGC4Q9Y5F7 938 aa13.36□□□□□ -0.27
RPAIN-216ENST00000575599 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 MATN3O15232 486 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 MAGEC1O60732 1142 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 TM7SF2O76062 418 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 ZNF883P0CG24 379 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 KRT10P13645 584 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 ZFXP17010 805 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 CCNCP24863 283 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 CDKN2BP42772 138 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 SUOXP51687 545 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 FAM193AP78312 1265 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 HNRNPDQ14103 355 aaKnown RBP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 SPOCD1Q6ZMY3 1216 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 GCNT7Q6ZNI0 430 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 PIP4P1Q86T03 277 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 IQCHQ86VS3 1027 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 SPATS2Q86XZ4 545 aaKnown RBP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 CCDC13Q8IYE1 715 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 KATNAL2Q8IYT4 538 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 OR13H1Q8NG92 308 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 SETD7Q8WTS6 366 aaKnown RBP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 MAML1Q92585 1016 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 ZNF592Q92610 1267 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 KRT35Q92764 455 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 ECHDC3Q96DC8 303 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 LGMNQ99538 433 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 ELF4Q99607 663 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 SEMA3CQ99985 751 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 C1QTNF2Q9BXJ5 285 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 POLR1EQ9GZS1 481 aaKnown RBP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 RBM22Q9NW64 420 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPAIN-216ENST00000575599 COQ6Q9Y2Z9 468 aa13.35□□□□□ -0.27
RPAIN-216ENST00000575599 A0A1B0GTQ1 180 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 A6NNZ2 444 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 KCNK1O00180 336 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 TRAFD1O14545 582 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-216ENST00000575599 CPP00450 1065 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 CEACAM1P13688 526 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 CCNB1P14635 433 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 CASQ1P31415 396 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 MMP12P39900 470 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 DSC2Q02487 901 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 PPIDQ08752 370 aaKnown RBP13.34□□□□□ -0.27
RPAIN-216ENST00000575599 AP1B1Q10567 949 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 OVGP1Q12889 678 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 TRAF2Q12933 501 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 TMEM52BQ4KMG9 183 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 KDM7AQ6ZMT4 941 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 B4GALNT4Q76KP1 1039 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 TEX26Q8N6G2 289 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 TSGA13Q96PP4 275 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 RYDENQ9NUL5 291 aaKnown RBP13.34□□□□□ -0.27
RPAIN-216ENST00000575599 HAUS2Q9NVX0 235 aa13.34□□□□□ -0.27
RPAIN-216ENST00000575599 SPAARA0A1B0GVQ0 90 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 GRID2IPA4D2P6 1211 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 POM121BA6NF01 834 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 A8MX80 341 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 FPGTO14772 594 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 PPP1R12AO14974 1030 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 DFNA5O60443 496 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 CST8O60676 142 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms