RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MBNL1Q9NR56 388 aaKnown RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 TM7SF3Q9NS93 570 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 DONSONQ9NYP3 566 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 IMPACTQ9P2X3 320 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 SEPT3Q9UH03 358 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 ATP8A1Q9Y2Q0 1164 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 PPIL1Q9Y3C6 166 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 U3KQA8 63 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 RP1P56715 2156 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 A0A0U1RQS6 177 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SPAARA0A1B0GVQ0 90 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 NPIPB15A6NHN6 443 aaPredicted RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 TLR4O00206 839 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 MATN3O15232 486 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SLC31A1O15431 190 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 DAPK3O43293 454 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 TSPAN6O43657 245 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 OPHN1O60890 802 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SOCS5O75159 536 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SOD1P00441 154 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 PDHA1P08559 390 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 KRT10P13645 584 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 C6P13671 934 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 CEACAM1P13688 526 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 CCNCP24863 283 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 PTPN7P35236 360 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 CYLC1P35663 651 aaPredicted RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 MMP13P45452 471 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 CCT8P50990 548 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 NOVA1P51513 510 aaKnown RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 RPS21P63220 83 aaKnown RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 IL9RQ01113 521 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 DSC2Q02487 901 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 HNRNPDQ14103 355 aaKnown RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 FZD2Q14332 565 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 IRF4Q15306 451 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 CNGA3Q16281 694 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 CDKN3Q16667 212 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 WSCD2Q2TBF2 565 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 UAP1L1Q3KQV9 507 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 PRAMEF14Q5SWL7 426 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 AADACL2Q6P093 401 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 BRAT1Q6PJG6 821 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SPOCD1Q6ZMY3 1216 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 DPPA4Q7L190 304 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 NT5DC3Q86UY8 548 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 ZNF354CQ86Y25 554 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 LRRC49Q8IUZ0 686 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 RHOT1Q8IXI2 618 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SPC24Q8NBT2 197 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 TRIB3Q96RU7 358 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 BAG1Q99933 345 aaPredicted RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 TDRD1Q9BXT4 1180 aaKnown RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 SLC17A9Q9BYT1 436 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 BRD8Q9H0E9 1235 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SAE1Q9UBE0 346 aaPredicted RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 COQ6Q9Y2Z9 468 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 FARP1Q9Y4F1 1045 aaPredicted RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 PCDHGC4Q9Y5F7 938 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
SMG6-216ENST00000575176 SMG1Q96Q15 3661 aaKnown RBP8.74□□□□□ -1.01
SMG6-216ENST00000575176 SPTY2D1-AS1A0A0U1RR47 76 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 KCNK1O00180 336 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 MMP20O60882 483 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 PGLSO95336 258 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 PAK4O96013 591 aaPredicted RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 THEGLP0DJG4 465 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 CTNNA2P26232 953 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 SERPINA4P29622 427 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 CD68P34810 354 aaPredicted RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 HSPA9P38646 679 aaKnown RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 SCNN1BP51168 640 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 SUOXP51687 545 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 SKOR1P84550 965 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 SHC2P98077 582 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 WASHC5Q12768 1159 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 OVGP1Q12889 678 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 EIF2B5Q13144 721 aaKnown RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 ZNF235Q14590 738 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 GRM3Q14832 879 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 PPP2R5EQ16537 467 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 IFI16Q16666 785 aaKnown RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 RALGPS1Q5JS13 557 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 FBXL19Q6PCT2 694 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 IL27RAQ6UWB1 636 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 LIPIQ6XZB0 460 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 B4GALNT4Q76KP1 1039 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 PRPF39Q86UA1 669 aaKnown RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 TSPAN33Q86UF1 283 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 ZSCAN30Q86W11 494 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 GATAD2AQ86YP4 633 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 SLC25A45Q8N413 288 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 RYBPQ8N488 228 aaPredicted RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 KCTD6Q8NC69 237 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 PLA2G15Q8NCC3 412 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 RNF25Q96BH1 459 aaPredicted RBP8.73□□□□□ -1.01
SMG6-216ENST00000575176 EID2BQ96D98 161 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 COQ10AQ96MF6 247 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 WRAP53Q9BUR4 548 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms