RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 TLR6Q9Y2C9 796 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 PCDHGA7Q9Y5G6 932 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 ARHGEF37A1IGU5 675 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 MROH6A6NGR9 719 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 J3KR12 359 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TXNDC9O14530 226 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 RPLP2P05387 115 aaKnown RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 CCDC166P0CW27 439 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 RHOQP17081 205 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 THPOP40225 353 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 CD86P42081 329 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 INHBCP55103 352 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 POLE2P56282 527 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 PSME3P61289 254 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 LRP8Q14114 963 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 RARS2Q5T160 578 aaKnown RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 RNF135Q8IUD6 432 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 AFAP1L2Q8N4X5 818 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TEX26Q8N6G2 289 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 RNF148Q8N7C7 305 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 ANKRD49Q8WVL7 239 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TMA16Q96EY4 203 aaKnown RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 HMCESQ96FZ2 354 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 PKP2Q99959 881 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 UPF3AQ9H1J1 476 aaKnown RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 MFSD1Q9H3U5 465 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 COPS7BQ9H9Q2 264 aaPredicted RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 VPS45Q9NRW7 570 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 SCML2Q9UQR0 700 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 VWA7Q9Y334 891 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 DOCK3Q8IZD9 2030 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 SCN10AQ9Y5Y9 1956 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 SLC7A4O43246 635 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 PENKP01210 267 aaPredicted RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 OR4Q2P0C623 313 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 PABPC4LP0CB38 370 aaKnown RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 ARSAP15289 507 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 C1QTNF8P60827 252 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SLC10A7Q0GE19 358 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 STX5Q13190 355 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 LPIN1Q14693 890 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 MAPRE2Q15555 327 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 MARC1Q5VT66 337 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 KLC3Q6P597 504 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 TMEM207Q6UWW9 146 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 CILP2Q8IUL8 1156 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SLC22A9Q8IVM8 553 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SCN4BQ8IWT1 228 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 TMEM102Q8N9M5 508 aaPredicted RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 KLHL5Q96PQ7 755 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 ADAM2Q99965 735 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 ZYG11BQ9C0D3 744 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 ZCWPW1Q9H0M4 648 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 GSTO2Q9H4Y5 243 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 TMEM248Q9NWD8 314 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SUCOQ9UBS9 1254 aaKnown RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 C15orf38-AP3S2A0A0A6YYH1 394 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 FBP2O00757 339 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 INPPL1O15357 1258 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 CRTAMO95727 393 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 S1PR4O95977 384 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SMIM18P0DKX4 95 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 HAPLN1P10915 354 aaPredicted RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SLC2A3P11169 496 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 IMPDH1P20839 514 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SLC26A3P40879 764 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 CLCN2P51788 898 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 MAXP61244 160 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 DSC2Q02487 901 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 YWHAHQ04917 246 aaPredicted RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SLC39A12Q504Y0 691 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 MS4A13Q5J8X5 152 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 REP15Q6BDI9 236 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 RPS27LQ71UM5 84 aaKnown RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 ARPINQ7Z6K5 226 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 ZNF598Q86UK7 904 aaKnown RBP8.99□□□□□ -0.97
NCBP3-204ENST00000574911 MON1AQ86VX9 555 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 ASB9Q96DX5 294 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SH3GL3Q99963 347 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 TRIM4Q9C037 500 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 Q9H521 79 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 UBAP1Q9NZ09 502 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 FIS1Q9Y3D6 152 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 TLL2Q9Y6L7 1015 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 SLC4A7Q9Y6M7 1214 aa8.99□□□□□ -0.97
NCBP3-204ENST00000574911 IGLV3-10A0A075B6K4 115 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 LOC285095A0A1B0GVY8 99 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 E7ENX8 843 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PSMD12O00232 456 aaPredicted RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 UBFD1O14562 309 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TRIM24O15164 1050 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 UBDO15205 165 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 CNTN5O94779 1100 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 C8BP07358 591 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ATXN1LP0C7T5 689 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 GSTT1P30711 240 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ARSDP51689 593 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 CDKN2DP55273 166 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TBX4P57082 545 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 NKX3-2P78367 333 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms