RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 TTC7BQ86TV6 843 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 C11orf74Q86VG3 221 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 LPCAT1Q8NF37 534 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 PIH1D2Q8WWB5 315 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 CD93Q9NPY3 652 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 IGHV1OR15-9A0A0B4J2B8 117 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 LOC285095A0A1B0GVY8 99 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 FAM187AA6NFU0 413 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 PLK4O00444 970 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 NDST3O95803 873 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 PRLP01236 227 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 PDHA1P08559 390 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 TIMP2P16035 220 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 HLA-DPA1P20036 260 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 CNR2P34972 360 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 VPS41P49754 854 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 NAPEPLDQ6IQ20 393 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 USP45Q70EL2 814 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 FAM124AQ86V42 546 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 ASIC3Q9UHC3 531 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 PPIL1Q9Y3C6 166 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 PCDHGA2Q9Y5H1 932 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 TTI1O43156 1089 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 ABL2P42684 1182 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 LMAN1P49257 510 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 SLC36A4Q6YBV0 504 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 TAB3Q8N5C8 712 aaPredicted RBP17.19■□□□□ 0.34
NUP88-210ENST00000574867 PDCD7Q8N8D1 485 aaKnown RBP17.19■□□□□ 0.34
NUP88-210ENST00000574867 OR14C36Q8NHC7 312 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 RLN3Q8WXF3 142 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 RMDN1Q96DB5 314 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 MCCC1Q96RQ3 725 aaPredicted RBP17.19■□□□□ 0.34
NUP88-210ENST00000574867 FICDQ9BVA6 458 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 PREBQ9HCU5 417 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 WSB2Q9NYS7 404 aaPredicted RBP17.19■□□□□ 0.34
NUP88-210ENST00000574867 FADS3Q9Y5Q0 445 aa17.19■□□□□ 0.34
NUP88-210ENST00000574867 A0A0J9YYE9 177 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 LRRC72A6NJI9 287 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 ANKRD66B4E2M5 251 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 AREL1O15033 823 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 TRBC1P01850 177 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 FGF1P05230 155 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 ADRA1AP35348 466 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 SLC1A5Q15758 541 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 LINC00523Q86TU6 105 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 ZBTB44Q8NCP5 570 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 GAB3Q8WWW8 586 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 SCRN2Q96FV2 425 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 TOE1Q96GM8 510 aaKnown RBP17.18■□□□□ 0.34
NUP88-210ENST00000574867 TBL1YQ9BQ87 522 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 PCED1AQ9H1Q7 454 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 PCDH12Q9NPG4 1184 aa17.18■□□□□ 0.34
NUP88-210ENST00000574867 CAPN8A6NHC0 703 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 TSPAN6O43657 245 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 RPP40O75818 363 aaKnown RBP17.17■□□□□ 0.34
NUP88-210ENST00000574867 SUN1O94901 812 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 SEMA4FO95754 770 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 APRTP07741 180 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 CYP2A6P11509 494 aaPredicted RBP17.17■□□□□ 0.34
NUP88-210ENST00000574867 TPSB2P20231 275 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 ACSL1P33121 698 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 MMP12P39900 470 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 MAGEA6P43360 314 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 TAS2R38P59533 333 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 CDK16Q00536 496 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 GALNT3Q14435 633 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 TPSAB1Q15661 275 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 C8orf74Q6P047 294 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 NEK5Q6P3R8 708 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 RANBP10Q6VN20 620 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 KDELC2Q7Z4H8 507 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 MMGT1Q8N4V1 131 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 OR2T34Q8NGX1 318 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 SRPK1Q96SB4 655 aaKnown RBP17.17■□□□□ 0.34
NUP88-210ENST00000574867 TPX2Q9ULW0 747 aaKnown RBP17.17■□□□□ 0.34
NUP88-210ENST00000574867 NEMP1O14524 444 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 RIOK3O14730 519 aaKnown RBP17.17■□□□□ 0.34
NUP88-210ENST00000574867 RAD51CO43502 376 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 ATXN1LP0C7T5 689 aaKnown RBP17.17■□□□□ 0.34
NUP88-210ENST00000574867 ADCY8P40145 1251 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 QPCTQ16769 361 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 LRRC73Q5JTD7 316 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 DPPA4Q7L190 304 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 LYSMD1Q96S90 227 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 CARD6Q9BX69 1037 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 ARNT2Q9HBZ2 717 aa17.17■□□□□ 0.34
NUP88-210ENST00000574867 NDC80O14777 642 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 SPINT1O43278 529 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 NDUFS2O75306 463 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 FAM193AP78312 1265 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 SIRPB2Q5JXA9 342 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 ZC3H14Q6PJT7 736 aaKnown RBP17.16■□□□□ 0.34
NUP88-210ENST00000574867 PCGF5Q86SE9 256 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 FAM160A2Q8N612 972 aaPredicted RBP17.16■□□□□ 0.34
NUP88-210ENST00000574867 TRIM51Q9BSJ1 452 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 KCNH6Q9H252 994 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 H0Y858 1186 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 AGTP01019 485 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 VIPR1P32241 457 aa17.16■□□□□ 0.34
NUP88-210ENST00000574867 KCNJ11Q14654 390 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms