RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 SAR1BQ9Y6B6 198 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 RNGTTO60942 597 aaKnown RBP33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 ITGAVP06756 1048 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 PDHA1P08559 390 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 NFKBIAP25963 317 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 SNX1Q13596 522 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 ZSCAN30Q86W11 494 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 HORMAD1Q86X24 394 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 CCDC110Q8TBZ0 833 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 PCDH9Q9HC56 1237 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 VPS45Q9NRW7 570 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 CHKBQ9Y259 395 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 A0A1W2PQU0 124 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 ZNF185O15231 689 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 FANCGO15287 622 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 MT-CYBP00156 380 aaPredicted RBP33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 ITIH2P19823 946 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 GDF10P55107 478 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 RPS21P63220 83 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 SYT12Q8IV01 421 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 PIH1D2Q8WWB5 315 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 RTP4Q96DX8 246 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 NCDNQ9UBB6 729 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 FAM153AQ9UHL3 310 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 PILRBQ9UKJ0 227 aa33.32■■■□□ 2.92
CTDNEP1-209ENST00000574205 ZFHX2Q9C0A1 2572 aaPredicted RBP33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 DOCK9Q9BZ29 2069 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 CD27P26842 260 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 MAOBP27338 520 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 HOXD12P35452 270 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 MMP12P39900 470 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 RPL26P61254 145 aaKnown RBP33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 PEAR1Q5VY43 1037 aaPredicted RBP33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 NDUFAF2Q8N183 169 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 PRELID2Q8N945 189 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 PIGKQ92643 395 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 ARRDC1-AS1Q9H2J1 176 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 EIF2B4Q9UI10 523 aaKnown RBP33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 RPL26L1Q9UNX3 145 aaKnown RBP33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 ZFR2Q9UPR6 939 aaKnown RBP33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 PPIL1Q9Y3C6 166 aa33.31■■■□□ 2.92
CTDNEP1-209ENST00000574205 A0A1W2PPC4 97 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 GCATO75600 419 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 PRLP01236 227 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 MAT2AP31153 395 aaKnown RBP33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 NUDT1P36639 197 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 FAM193AP78312 1265 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 TMEM52BQ4KMG9 183 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 TMEM259Q4ZIN3 620 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 NYAP1Q6ZVC0 841 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 ASCL5Q7RTU5 278 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 RUBCNQ92622 972 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 UBP1Q9NZI7 540 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 DRG1Q9Y295 367 aaKnown RBP33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 FRYLO94915 3013 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 RALGAPA1Q6GYQ0 2036 aa33.3■■■□□ 2.92
CTDNEP1-209ENST00000574205 PRKCGP05129 697 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 MPLP40238 635 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 EPHB1P54762 984 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 SEL1L3Q68CR1 1132 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 CXorf40AQ8TE69 158 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 SCRN2Q96FV2 425 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 ADGRE3Q9BY15 652 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 TMEM74BQ9NUR3 256 aa33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 ATXN2Q99700 1313 aaKnown RBP33.29■■■□□ 2.92
CTDNEP1-209ENST00000574205 MPP3Q13368 585 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 PCSK7Q16549 785 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 ZNF284Q2VY69 593 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 P3H1Q32P28 736 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 SETMARQ53H47 684 aaPredicted RBP33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 ARHGEF18Q6ZSZ5 1173 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 USP45Q70EL2 814 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 OXNAD1Q96HP4 312 aaPredicted RBP33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 PPP1R2P1Q96PQ5 205 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 ORAI3Q9BRQ5 295 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 MIR1-1HGQ9H1L0 117 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 EBF2Q9HAK2 575 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 SMARCAL1Q9NZC9 954 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 SUSD2Q9UGT4 822 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 DMTF1Q9Y222 760 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 PMPCBO75439 489 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 ANXA9O76027 345 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 PSMB4P28070 264 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 GRIA4P48058 902 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 CDK18Q07002 472 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 DPPA4Q7L190 304 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 MCCC1Q96RQ3 725 aaPredicted RBP33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 TRIB3Q96RU7 358 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 AP1M1Q9BXS5 423 aa33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 AAR2Q9Y312 384 aaKnown RBP33.28■■■□□ 2.92
CTDNEP1-209ENST00000574205 PI4KAP42356 2102 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 RIF1Q5UIP0 2472 aaKnown RBP33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 A0A0J9YYE9 177 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 F5H423 210 aaPredicted RBP33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 TRBC1P01850 177 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 GNSP15586 552 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 CASQ1P31415 396 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 PRPSAP1Q14558 356 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 KDELC1Q6UW63 502 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 SYT10Q6XYQ8 523 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms