RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TM7SF2O76062 418 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 PGLSO95336 258 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 RBL1P28749 1068 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 AKT2P31751 481 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 CD86P42081 329 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 GRIA4P48058 902 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 ATXN3P54252 364 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 RPL26P61254 145 aaKnown RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 TRAF2Q12933 501 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 STAT4Q14765 748 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 TMEM52BQ4KMG9 183 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 AASDHQ4L235 1098 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 NAPEPLDQ6IQ20 393 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 CCDC70Q6NSX1 233 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 PRR23CQ6ZRP0 262 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 B4GALNT4Q76KP1 1039 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC35F6Q8N357 371 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 CNTD1Q8N815 330 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 ARRDC2Q8TBH0 407 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 LRRC45Q96CN5 670 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 IMP4Q96G21 291 aaKnown RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 NAP1L3Q99457 506 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 TDRD1Q9BXT4 1180 aaKnown RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZDHHC5Q9C0B5 715 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 AASDHPPTQ9NRN7 309 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 KCTD5Q9NXV2 234 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 RPL26L1Q9UNX3 145 aaKnown RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZKSCAN5Q9Y2L8 839 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 LRRK1Q38SD2 2015 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 GOLGA6CA6NDK9 693 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 GOLGA6BA6NDN3 693 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ENC1O14682 589 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC31A1O15431 190 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 FGGP02679 453 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ELFN1P0C7U0 828 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 GOLGA6DP0CG33 693 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 HNRNPA2B1P22626 353 aaKnown RBP12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 CD38P28907 300 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 STIP1P31948 543 aaKnown RBP12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ACTN2P35609 894 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 MMP12P39900 470 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 C21orf59P57076 290 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ARHGAP8P85298 464 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 LMNB2Q03252 620 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 NIPAL4Q0D2K0 466 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 WASHC5Q12768 1159 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 OVGP1Q12889 678 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ARHGEF7Q14155 803 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 PRPSAP1Q14558 356 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 CCDC6Q16204 474 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZNF284Q2VY69 593 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 TMEM259Q4ZIN3 620 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 LRRC73Q5JTD7 316 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 IL27RAQ6UWB1 636 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 DPPA4Q7L190 304 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ASB12Q8WXK4 309 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 IFT43Q96FT9 208 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 RBM15Q96T37 977 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 TM9SF3Q9HD45 589 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 GOLGA6AQ9NYA3 693 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 FAM153AQ9UHL3 310 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 RSPH14Q9UHP6 348 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 PYCARDQ9ULZ3 195 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZFR2Q9UPR6 939 aaKnown RBP12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
TRAPPC1-206ENST00000573989 TP53BP1Q12888 1972 aaPredicted RBP12.83□□□□□ -0.35
TRAPPC1-206ENST00000573989 IGLON5A6NGN9 336 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 C10orf142B7Z368 130 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ARHGAP33O14559 1287 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 LZTS3O60299 673 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 MMP20O60882 483 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 OPHN1O60890 802 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ANXA9O76027 345 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 PAK4O96013 591 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 CXCR5P32302 372 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 GNG11P61952 73 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 SKOR1P84550 965 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 MPP3Q13368 585 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ANKRD20A2Q5SQ80 823 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ANKRD20A1Q5TYW2 823 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ANKRD20A3Q5VUR7 823 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 SEL1L3Q68CR1 1132 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ARHGEF18Q6ZSZ5 1173 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 IQCHQ86VS3 1027 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ZSWIM9Q86XI8 627 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 KIAA2013Q8IYS2 634 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 DENND6BQ8NEG7 585 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 C1orf216Q8TAB5 229 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 SLC35B2Q8TB61 432 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 KLK6Q92876 244 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 RMDN1Q96DB5 314 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 SCRN2Q96FV2 425 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 NSMCE3Q96MG7 304 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 LENG8Q96PV6 779 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms