RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 CCDC138Q96M89 665 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 SEC62Q99442 399 aaKnown RBP3.81□□□□□ -1.8
CDC27-213ENST00000571643 ANP32EQ9BTT0 268 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 NAA15Q9BXJ9 866 aaKnown RBP3.81□□□□□ -1.8
CDC27-213ENST00000571643 MYLK2Q9H1R3 596 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 DBNDD1Q9H9R9 158 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 MLXIPQ9HAP2 919 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 ARFGAP3Q9NP61 516 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 XPO7Q9UIA9 1087 aaKnown RBP3.81□□□□□ -1.8
CDC27-213ENST00000571643 COG5Q9UP83 839 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 MAN2B2Q9Y2E5 1009 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 TMEM98Q9Y2Y6 226 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 CEP83Q9Y592 693 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 MAGED1Q9Y5V3 778 aaPredicted RBP3.81□□□□□ -1.8
CDC27-213ENST00000571643 ECM29Q5VYK3 1845 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 GOLGB1Q14789 3259 aaKnown RBP3.81□□□□□ -1.8
CDC27-213ENST00000571643 ARAP2Q8WZ64 1704 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 COL4A1P02462 1669 aa3.81□□□□□ -1.8
CDC27-213ENST00000571643 MYH13Q9UKX3 1938 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 ZNF646O15015 1829 aaPredicted RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 TMEM272A0A1B0GTI8 110 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 GAGE12JA6NER3 117 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 NCAM2O15394 837 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 FRAT2O75474 233 aaPredicted RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 TAF5LO75529 589 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 SURF6O75683 361 aaKnown RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 ALDOAP04075 364 aaKnown RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 FGF2P09038 288 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 ALADP13716 330 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 CASQ1P31415 396 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 NF2P35240 595 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 CHKAP35790 457 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 KRT20P35900 424 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 SSR1P43307 286 aaKnown RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 ZNF132P52740 706 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 GSTO1P78417 241 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 PTGR1Q14914 329 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 SMTNL2Q2TAL5 461 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 LRRC24Q50LG9 513 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 ARHGAP15Q53QZ3 475 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 TTC39AQ5SRH9 613 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 C6orf10Q5SRN2 563 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 TMEM88Q6PEY1 159 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 PELI3Q8N2H9 469 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 TMEM199Q8N511 208 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 ARL14EPQ8N8R7 260 aaPredicted RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 WASF1Q92558 559 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 ZNF566Q969W8 418 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 HVCN1Q96D96 273 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 KIF1BPQ96EK5 621 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 ZBED3Q96IU2 234 aaPredicted RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 ZMAT2Q96NC0 199 aaKnown RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 ABHD14AQ9BUJ0 271 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 ELOVL1Q9BW60 279 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 SF3B5Q9BWJ5 86 aaKnown RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 SLC26A6Q9BXS9 759 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 PUS3Q9BZE2 481 aaKnown RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 LMAN2LQ9H0V9 348 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 RBM38Q9H0Z9 239 aaKnown RBP3.8□□□□□ -1.8
CDC27-213ENST00000571643 MYOZ2Q9NPC6 264 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 RRN3Q9NYV6 651 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 GPR52Q9Y2T5 361 aa3.8□□□□□ -1.8
CDC27-213ENST00000571643 A0A0G2JK05 382 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 PNMA6EA0A0J9YXQ4 647 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 A0A1B0GUL7 405 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 FAM234BA2RU67 622 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 PODXLO00592 558 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 PPP6R2O75170 966 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 FGF18O76093 207 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 GFPT2O94808 682 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 NDST3O95803 873 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 ITGA5P08648 1049 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 GLULP15104 373 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 ELF1P32519 619 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 KRT9P35527 623 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 MAP2K2P36507 400 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 GYG1P46976 350 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 RRP1P56182 461 aaKnown RBP3.79□□□□□ -1.8
CDC27-213ENST00000571643 PPATQ06203 517 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 PMS2P11Q13670 270 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 PGM5Q15124 567 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 PTPN14Q15678 1187 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 CCNG2Q16589 344 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 SLC35G1Q2M3R5 365 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 DEFB115Q30KQ5 88 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 PIK3CD-AS1Q5SR53 167 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 ITPRIPL1Q6GPH6 555 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 ZNF449Q6P9G9 518 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 TMCO3Q6UWJ1 677 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 CYP26C1Q6V0L0 522 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 SLC39A5Q6ZMH5 540 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 CYB5R4Q7L1T6 521 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 CCAR2Q8N163 923 aaKnown RBP3.79□□□□□ -1.8
CDC27-213ENST00000571643 PAQR4Q8N4S7 273 aaPredicted RBP3.79□□□□□ -1.8
CDC27-213ENST00000571643 GLIS1Q8NBF1 620 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 DEPTORQ8TB45 409 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 WDR60Q8WVS4 1066 aa3.79□□□□□ -1.8
CDC27-213ENST00000571643 USP13Q92995 863 aaPredicted RBP3.79□□□□□ -1.8
CDC27-213ENST00000571643 TEKT1Q969V4 418 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms