RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 DHRS13Q6UX07 377 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 APCDD1Q8J025 514 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 ZNF557Q8N988 423 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-209ENST00000571558 FAM71DQ8N9W8 422 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 GLIS1Q8NBF1 620 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 HTR3CQ8WXA8 447 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 MAML1Q92585 1016 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 LRRC1Q9BTT6 524 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 FBRSQ9HAH7 460 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 ABCB8Q9NUT2 735 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 ELOVL2Q9NXB9 296 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 FTSJ1Q9UET6 329 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 FEZ2Q9UHY8 353 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-209ENST00000571558 KNTC1P50748 2209 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 CABIN1Q9Y6J0 2220 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 EFCAB8A8MWE9 144 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 MATN3O15232 486 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 KCNN4O15554 427 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 TTI1O43156 1089 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 ZNF189O75820 626 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-209ENST00000571558 JUPP14923 745 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 GLDCP23378 1020 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 CD27P26842 260 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 IFI35P80217 286 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-209ENST00000571558 MRPS25P82663 173 aaKnown RBP13.91□□□□□ -0.18
RPAIN-209ENST00000571558 AP1B1Q10567 949 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 ZNF234Q14588 700 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 RTP5Q14D33 572 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 KCTD19Q17RG1 926 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-209ENST00000571558 GPR155Q7Z3F1 870 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 MARCH9Q86YJ5 346 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 JAMLQ86YT9 394 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-209ENST00000571558 CCDC13Q8IYE1 715 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 ZNF843Q8N446 348 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 DCAF4L2Q8NA75 395 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 OR2T3Q8NH03 318 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 SNIP1Q8TAD8 396 aaKnown RBP13.91□□□□□ -0.18
RPAIN-209ENST00000571558 GRK7Q8WTQ7 553 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 FCRL3Q96P31 734 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-209ENST00000571558 MUC3BQ9H195 1237 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 ATP13A1Q9HD20 1204 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 TM9SF3Q9HD45 589 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 GGA2Q9UJY4 613 aa13.91□□□□□ -0.18
RPAIN-209ENST00000571558 CXorf51AA0A1B0GTR3 108 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 C5orf60A6NFR6 353 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 FAM187AA6NFU0 413 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 KCNK1O00180 336 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 RNF103O00237 685 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 PLK4O00444 970 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 MTSS1O43312 755 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 ECEL1O95672 775 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 CD160O95971 181 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 EPHX1P07099 455 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 PABPC1P11940 636 aaKnown RBP13.9□□□□□ -0.18
RPAIN-209ENST00000571558 ITPKBP27987 946 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 CTSKP43235 329 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 ARF5P84085 180 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 ZBTB17Q13105 803 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 CAMK2GQ13555 558 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-209ENST00000571558 PTK6Q13882 451 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 GEN1Q17RS7 908 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 GLE1Q53GS7 698 aaKnown RBP13.9□□□□□ -0.18
RPAIN-209ENST00000571558 PITRM1Q5JRX3 1037 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 FAM182AQ5T1J6 154 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 TMEM215Q68D42 235 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 TIGD7Q6NT04 549 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-209ENST00000571558 C8orf74Q6P047 294 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 SERPINA13PQ6UXR4 307 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-209ENST00000571558 MAATS1Q7Z4T9 603 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 PRUNE1Q86TP1 453 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 ADIPOR2Q86V24 386 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 CACTIN-AS1Q8N1I8 211 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 TEX26Q8N6G2 289 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 SNX19Q92543 992 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 SKA1Q96BD8 255 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 CCDC114Q96M63 670 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 ZNF599Q96NL3 588 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 IL12RB2Q99665 862 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 SPON2Q9BUD6 331 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 VPS51Q9UID3 782 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 VPS28Q9UK41 221 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 SHROOM3Q8TF72 1996 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 NAV2Q8IVL1 2488 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 KNL1Q8NG31 2342 aa13.9□□□□□ -0.18
RPAIN-209ENST00000571558 H0Y8X5 98 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 J3QKU1 62 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 SNAP91O60641 907 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 GCATO75600 419 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 ZSCAN5DPP0CG00 497 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 CCNB1P14635 433 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 ETS1P14921 441 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 PTPN3P26045 913 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 NUMBP49757 651 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 TUBB4BP68371 445 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 CNTD1Q8N815 330 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 TTC17Q96AE7 1141 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 BIRC7Q96CA5 298 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 WBP1Q96G27 269 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms