RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SNAI1O95863 264 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 STT3AP46977 705 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 CENPFP49454 3210 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 CXCR3P49682 368 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 LPIN1Q14693 890 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 ZNF792Q3KQV3 632 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 SAMD4BQ5PRF9 694 aaKnown RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 UBXN11Q5T124 520 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 LDB1Q86U70 411 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 ERI1Q8IV48 349 aaKnown RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 AFAP1L2Q8N4X5 818 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 TOP1MTQ969P6 601 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 SLC25A23Q9BV35 468 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 TMEM181Q9P2C4 612 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 TRAF6Q9Y4K3 522 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 ANXA9O76027 345 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 ATP6V1B2P21281 511 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 DNAJB2P25686 324 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 KPNA2P52292 529 aaKnown RBP17.56■□□□□ 0.4
SCARF1-205ENST00000571272 POU4F1Q01851 419 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 POTEHQ6S545 545 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 ANKRD49Q8WVL7 239 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-205ENST00000571272 SENP8Q96LD8 212 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 FCRL5Q96RD9 977 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 NDFIP2Q9NV92 336 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 GIMAP2Q9UG22 337 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 EGFL7Q9UHF1 273 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 MEIS3P2A8K0S8 358 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 GABRDO14764 452 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 SUPT7LO94864 414 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 F9P00740 461 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 DNAJB1P25685 340 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 NHSL2Q5HYW2 709 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 DCLRE1AQ6PJP8 1040 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 CYHR1Q6ZMK1 362 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 ALDH16A1Q8IZ83 802 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 RIN3Q8TB24 985 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 SNRNP27Q8WVK2 155 aaKnown RBP17.56■□□□□ 0.4
SCARF1-205ENST00000571272 DCPSQ96C86 337 aaKnown RBP17.56■□□□□ 0.4
SCARF1-205ENST00000571272 PGAP3Q96FM1 320 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-205ENST00000571272 FAR2Q96K12 515 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 C3orf30Q96M34 536 aa17.56■□□□□ 0.4
SCARF1-205ENST00000571272 CLK4Q9HAZ1 481 aaKnown RBP17.56■□□□□ 0.4
SCARF1-205ENST00000571272 IPO11Q9UI26 975 aaKnown RBP17.56■□□□□ 0.4
SCARF1-205ENST00000571272 CCL22O00626 93 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 PTGESO14684 152 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 CACNG3O60359 315 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 STAMBPO95630 424 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 ETFBP38117 255 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 CDH13P55290 713 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 PFKPQ01813 784 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 SNX17Q15036 470 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 AGAP9Q5VTM2 703 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 PM20D1Q6GTS8 502 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 RETREG3Q86VR2 466 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 FUNDC1Q8IVP5 155 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 ZNF786Q8N393 782 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 CBR4Q8N4T8 237 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 EXT2Q93063 718 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 RANBP9Q96S59 729 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 KATNBL1Q9H079 304 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 UPF3AQ9H1J1 476 aaKnown RBP17.55■□□□□ 0.4
SCARF1-205ENST00000571272 TREX1Q9NSU2 369 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 RBM22Q9NW64 420 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCARF1-205ENST00000571272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-205ENST00000571272 PTGDR2Q9Y5Y4 395 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 HLA-DQB2P05538 268 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 SMIM10L2AP0DMW4 78 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 SMIM10L2BP0DMW5 78 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 PAMP19021 973 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 KCNC1P48547 511 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 POLD2P49005 469 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 KIF19Q2TAC6 998 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 BHLHA9Q7RTU4 235 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 CLVS1Q8IUQ0 354 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-205ENST00000571272 ARHGAP12Q8IWW6 846 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 ANKRD13AQ8IZ07 590 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 SMG8Q8ND04 991 aaKnown RBP17.55■□□□□ 0.4
SCARF1-205ENST00000571272 ANKRD60Q9BZ19 345 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 TRIM8Q9BZR9 551 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 SLC39A8Q9C0K1 460 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 ALG9Q9H6U8 611 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 CIDEBQ9UHD4 219 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 OTOFQ9HC10 1997 aa17.55■□□□□ 0.4
SCARF1-205ENST00000571272 LTA4HP09960 611 aaKnown RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 CCNCP24863 283 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 XKR4Q5GH76 650 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 KLHL35Q6PF15 583 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 SPPL2CQ8IUH8 684 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 TSGA13Q96PP4 275 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 UHRF1Q96T88 793 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 DCUN1D5Q9BTE7 237 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 RRN3Q9NYV6 651 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 EBF1Q9UH73 591 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 MYLKQ15746 1914 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 NR5A2O00482 541 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 MAFKO60675 156 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 ALDOCP09972 364 aaKnown RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 SOX11P35716 441 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms