RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	ZKSCAN5	Q9Y2L8	839 aa		11.65	□□□□□ -0.54
ATP2A3-208	ENST00000570845	DMXL1	Q9Y485	3027 aa		11.65	□□□□□ -0.54
ATP2A3-208	ENST00000570845	CTAGE9	A4FU28	777 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CFAP69	A5D8W1	941 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PGRMC1	O00264	195 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CES2	O00748	559 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	RIOK3	O14730	519 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	AREL1	O15033	823 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TSPAN6	O43657	245 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PGLS	O95336	258 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	MT-CYB	P00156	380 aa	Predicted RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PDHA1	P08559	390 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TCP1	P17987	556 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	MMP12	P39900	470 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	MPL	P40238	635 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	DPP6	P42658	865 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	EPHB1	P54762	984 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	GDF10	P55107	478 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	RPS21	P63220	83 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	FAM193A	P78312	1265 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SEMG2	Q02383	582 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	OASL	Q15646	514 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CCDC6	Q16204	474 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PCSK7	Q16549	785 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CCNG2	Q16589	344 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	HS1BP3	Q53T59	392 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ITPRIPL1	Q6GPH6	555 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	KIAA1161	Q6NSJ0	714 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	NEK5	Q6P3R8	708 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PRPF39	Q86UA1	669 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	HORMAD1	Q86X24	394 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SYT12	Q8IV01	421 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	FAM71D	Q8N9W8	422 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SPATA22	Q8NHS9	363 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CCDC110	Q8TBZ0	833 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CXorf40A	Q8TE69	158 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	DNASE2B	Q8WZ79	361 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	KLK6	Q92876	244 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	FAM122A	Q96E09	287 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	FEM1C	Q96JP0	617 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	NAP1L3	Q99457	506 aa	Predicted RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	WRAP53	Q9BUR4	548 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	GBA3	Q9H227	469 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PCDH9	Q9HC56	1237 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TMEM74B	Q9NUR3	256 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	UBP1	Q9NZI7	540 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PILRB	Q9UKJ0	227 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TPX2	Q9ULW0	747 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PHTF1	Q9UMS5	762 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ZFR2	Q9UPR6	939 aa	Known RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ZNF148	Q9UQR1	794 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CHKB	Q9Y259	395 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PCDHGA5	Q9Y5G8	931 aa		11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PTPRZ1	P23471	2315 aa	Predicted RBP	11.64	□□□□□ -0.55
ATP2A3-208	ENST00000570845		A0A1W2PPC4	97 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845		A8MX80	341 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	C10orf142	B7Z368	130 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ZNF185	O15231	689 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	LAT	O43561	262 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	FZD6	O60353	706 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	GFRA3	O60609	400 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PMPCB	O75439	489 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CTPS1	P17812	591 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	NFKBIA	P25963	317 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CD27	P26842	260 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PSMB4	P28070	264 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SPEM2	Q0P670	501 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SLC14A2	Q15849	920 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TMEM52B	Q4KMG9	183 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TMEM259	Q4ZIN3	620 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SETMAR	Q53H47	684 aa	Predicted RBP	11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PAPD7	Q5XG87	772 aa	Known RBP	11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SEL1L3	Q68CR1	1132 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ARHGEF18	Q6ZSZ5	1173 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	DPPA4	Q7L190	304 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	KDELC2	Q7Z4H8	507 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	NDUFAF2	Q8N183	169 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ZCCHC9	Q8N567	271 aa	Known RBP	11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	DCLK2	Q8N568	766 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	LPCAT1	Q8NF37	534 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ACTRT1	Q8TDG2	376 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	PIH1D2	Q8WWB5	315 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SPOCK2	Q92563	424 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	RUBCN	Q92622	972 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TADA1	Q96BN2	335 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	IFT43	Q96FT9	208 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SPATA13	Q96N96	652 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	FCRL5	Q96RD9	977 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	AP1M1	Q9BXS5	423 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	EBF2	Q9HAK2	575 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	HOMER3	Q9NSC5	361 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SMARCAL1	Q9NZC9	954 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	B4GALT6	Q9UBX8	382 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	SUSD2	Q9UGT4	822 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	FAM153A	Q9UHL3	310 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	CFAP54	Q96N23	3096 aa		11.63	□□□□□ -0.55
ATP2A3-208	ENST00000570845	GVINP1	Q7Z2Y8	2422 aa		11.62	□□□□□ -0.55
ATP2A3-208	ENST00000570845	GOLGA4	Q13439	2230 aa	Known RBP	11.62	□□□□□ -0.55

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