RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 UBXN1Q04323 297 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 VAC14Q08AM6 782 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 CA9Q16790 459 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 UGP2Q16851 508 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 PARP15Q460N3 678 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 TMEM52BQ4KMG9 183 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 INO80DQ53TQ3 878 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 DCUN1D2Q6PH85 259 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 JAMLQ86YT9 394 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 SDR16C5Q8N3Y7 309 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 PAF1Q8N7H5 531 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 PLA2G15Q8NCC3 412 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 TSEN2Q8NCE0 465 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 NAT6Q93015 286 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 PDXPQ96GD0 296 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 CNPY3Q9BT09 278 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 APOOQ9BUR5 198 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 CPEB1Q9BZB8 566 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 EDEM3Q9BZQ6 932 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 SLC39A8Q9C0K1 460 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 RETREG1Q9H6L5 497 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 SUDS3Q9H7L9 328 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 CATSPERBQ9H7T0 1116 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 EPB41L5Q9HCM4 733 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 MRPL40Q9NQ50 206 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 TAS2R14Q9NYV8 317 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 KLQ9UEF7 1012 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 MOSPD1Q9UJG1 213 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 MFHAS1Q9Y4C4 1052 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 KALRNO60229 2985 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCDC187A0A096LP49 1063 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 A0A1W2PQM1 296 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 LGALS16A8MUM7 142 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 CDRT15L2A8MXV6 281 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ERVH48-1M5A8F1 160 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 DFFAO00273 331 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 RIOK3O14730 519 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 PRAMEF11O60813 436 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 TCEA3O75764 348 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 PALMO75781 387 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 CDK11BP21127 795 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 PSMA2P25787 234 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 HTR1BP28222 390 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 BLKP51451 505 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 UCNP55089 124 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 GSCP56915 257 aaPredicted RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 RHDQ02161 417 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ELP6Q0PNE2 266 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 SRSF6Q13247 344 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 CLN3Q13286 438 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 NFATC4Q14934 902 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ELOCQ15369 112 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 TGIF1Q15583 401 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 CT47A1Q5JQC4 288 aaPredicted RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ERAP2Q6P179 960 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARHGAP36Q6ZRI8 547 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 TP53INP2Q8IXH6 220 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 MCOLN2Q8IZK6 566 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 UMODL1-AS1Q8N2C9 162 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 FBXO39Q8N4B4 442 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARL14Q8N4G2 192 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARL10Q8N8L6 244 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 LSM14AQ8ND56 463 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 SCG3Q8WXD2 468 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 CASKIN2Q8WXE0 1202 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 OR1E3Q8WZA6 343 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 FUBP1Q96AE4 644 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 GFM1Q96RP9 751 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 DPH1Q9BZG8 443 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 TRIM7Q9C029 511 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 DHX35Q9H5Z1 703 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 LRRC19Q9H756 370 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 PDFQ9HBH1 243 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 LMBRD1Q9NUN5 540 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 PCSK1NQ9UHG2 260 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ATXN7L1Q9ULK2 861 aaPredicted RBP8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ATP8A1Q9Y2Q0 1164 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 PCDHGA8Q9Y5G5 932 aa8.67□□□□□ -1.02
CTDNEP1-203ENST00000570385 ANKRD36A6QL64 1941 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TSPAN11A1L157 253 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TMEM202A6NGA9 273 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 WASH4PA8MWX3 477 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 EEF2KO00418 725 aaKnown RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 NTN3O00634 580 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 PLD2O14939 933 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 FGF10O15520 208 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TEX33O43247 280 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 DAPK3O43293 454 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 RECQL5O94762 991 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TNFP01375 233 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 ALPIP09923 528 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 SLC5A2P31639 672 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 UGT1A5P35504 534 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 PEX5P50542 639 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 SKOR1P84550 965 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 RALGDSQ12967 914 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 PPP6R3Q5H9R7 873 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 DENND2CQ68D51 928 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms