RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CAMK1DQ8IU85 385 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LRRC49Q8IUZ0 686 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SDR16C5Q8N3Y7 309 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CSPG4P5Q96PW8 444 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CINPQ9BW66 212 aaPredicted RBP17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 MBNL1Q9NR56 388 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SPASTQ9UBP0 616 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LCMT1Q9UIC8 334 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.22■□□□□ 0.353e-9■□□□□ 8.9
MAP1LC3B-208ENST00000570189 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 DFFAO00273 331 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 FFAR2O15552 330 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 HTRA2O43464 458 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TPM3P06753 285 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 C6P13671 934 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ITIH2P19823 946 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 DAB2P98082 770 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 BCL2L1Q07817 233 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CYP4F3Q08477 520 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TARDBPQ13148 414 aaKnown RBP eCLIP17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LBRQ14739 615 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LRRC14Q15048 493 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 IRF4Q15306 451 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ZNF542PQ5EBM4 170 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 WRAP53Q9BUR4 548 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NUP85Q9BW27 656 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 BOCQ9BWV1 1114 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PCDH18Q9HCL0 1135 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 IFNKQ9P0W0 207 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ANAPC7Q9UJX3 599 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CLCA2Q9UQC9 943 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ZFYVE26Q68DK2 2539 aa17.21■□□□□ 0.35
MAP1LC3B-208ENST00000570189 RP1P56715 2156 aa17.21■□□□□ 0.34
MAP1LC3B-208ENST00000570189 A0A087WV48 116 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LMO7DNF2Z398 122 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MYO1FO00160 1098 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MUSKO15146 869 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MAFKO60675 156 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SOCS5O75159 536 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 EIF4A3P38919 411 aaKnown RBP17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LIG3P49916 1009 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 BLKP51451 505 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SLC10A7Q0GE19 358 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 RALGDSQ12967 914 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MTM1Q13496 603 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SMTNL2Q2TAL5 461 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 WSCD2Q2TBF2 565 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CFAP58Q5T655 872 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TXNRD3NBQ6F5E7 133 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 DPPA4Q7L190 304 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PHACTR4Q8IZ21 702 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 DNAJC7Q99615 494 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MGME1Q9BQP7 344 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 UVRAGQ9P2Y5 699 aa17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 APOBEC3BQ9UH17 382 aaKnown RBP17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PNMA8BQ9ULN7 279 aaPredicted RBP17.2■□□□□ 0.34
MAP1LC3B-208ENST00000570189 OPA1O60313 960 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NEBLO76041 1014 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 HOXC4P09017 264 aaPredicted RBP17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 AMPD1P23109 780 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 IL4RP24394 825 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CASP14P31944 242 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ARSEP51690 589 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CDH6P55285 790 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TRIM14Q14142 442 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ASTE1Q2TB18 679 aaPredicted RBP17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CCDC122Q5T0U0 273 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LVRNQ6Q4G3 990 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LIPIQ6XZB0 460 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TP53INP2Q8IXH6 220 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 FSTL5Q8N475 847 aaPredicted RBP17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ATL2Q8NHH9 583 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 HSPH1Q92598 858 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 FATE1Q969F0 183 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NUDCD1Q96RS6 583 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LRRC61Q9BV99 259 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SLC13A1Q9BZW2 595 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 XPO4Q9C0E2 1151 aaKnown RBP17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CAAP1Q9H8G2 361 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 KCTD5Q9NXV2 234 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 RAXQ9Y2V3 346 aa17.19■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SSU72P8A0A1W2PR75 194 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 EME2A4GXA9 379 aaPredicted RBP17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 GCATO75600 419 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MT-CO3P00414 261 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TRIM23P36406 574 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SCNN1BP51168 640 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CLDN6P56747 220 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 KIAA1024LP59773 190 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PPARDQ03181 441 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NFATC4Q14934 902 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SLC18A3Q16572 532 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 C6orf132Q5T0Z8 1188 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ALG1LQ6GMV1 187 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 KDM7AQ6ZMT4 941 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 BBS5Q8N3I7 341 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms