RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 APOOQ9BUR5 198 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 LRRN3Q9H3W5 708 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 PCDH12Q9NPG4 1184 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 TAB2Q9NYJ8 693 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 KLQ9UEF7 1012 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 NOCTQ9UK39 431 aaKnown RBP12.18□□□□□ -0.46
CAPN3-220ENST00000569827 LOXL2Q9Y4K0 774 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 A8MX80 341 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 RASA4BC9J798 803 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 EPHB6O15197 1021 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 RASA4O43374 803 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 CREB3O43889 395 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 RASGRP1O95267 797 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 RGRP47804 291 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 GEMIN4P57678 1058 aaKnown RBP12.17□□□□□ -0.46
CAPN3-220ENST00000569827 NRG1Q02297 640 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-220ENST00000569827 CYTH1Q15438 398 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 TMEM52BQ4KMG9 183 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 SCYL2Q6P3W7 929 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 CCNJLQ8IV13 435 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 PELI3Q8N2H9 469 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 FSTL5Q8N475 847 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-220ENST00000569827 RTL3Q8N8U3 475 aaKnown RBP12.17□□□□□ -0.46
CAPN3-220ENST00000569827 MSANTD4Q8NCY6 345 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 CCL4L1Q8NHW4 92 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 OR1E3Q8WZA6 343 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 PCDHB18PQ96TA0 734 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 C1QTNF7Q9BXJ2 289 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 STRADBQ9C0K7 418 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 FGF22Q9HCT0 170 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 NLRC4Q9NPP4 1024 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 SAMSN1Q9NSI8 373 aaKnown RBP12.17□□□□□ -0.46
CAPN3-220ENST00000569827 GPATCH2LQ9NWQ4 482 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 MOSPD1Q9UJG1 213 aa12.17□□□□□ -0.46
CAPN3-220ENST00000569827 HEMK1Q9Y5R4 338 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-220ENST00000569827 TMEM202A6NGA9 273 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 J3KR12 359 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 CCP110O43303 1012 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 BUB1BO60566 1050 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-220ENST00000569827 CYP1A1P04798 512 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-220ENST00000569827 ALPIP09923 528 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 EPHB2P29323 1055 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 RFC1P35251 1148 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-220ENST00000569827 LIG3P49916 1009 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 RAD51Q06609 339 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 BECN1Q14457 450 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 PHF19Q5T6S3 580 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 ACBD5Q5T8D3 534 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-220ENST00000569827 TAF8Q7Z7C8 310 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 GKN2Q86XP6 184 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 CAMK1DQ8IU85 385 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 FAM46DQ8NEK8 389 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 WDR48Q8TAF3 677 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 HTR3CQ8WXA8 447 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 USP7Q93009 1102 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 PMEPA1Q969W9 287 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 CELF6Q96J87 481 aaKnown RBP12.16□□□□□ -0.46
CAPN3-220ENST00000569827 TBATAQ96M53 351 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 WDR92Q96MX6 357 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 ARHGAP9Q9BRR9 750 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 TMEM168Q9H0V1 697 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 GANQ9H2C0 597 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 SEMA6CQ9H3T2 930 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 RDH14Q9HBH5 336 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 DAAM1Q9Y4D1 1078 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 RNF215Q9Y6U7 377 aa12.16□□□□□ -0.46
CAPN3-220ENST00000569827 ZNF106Q9H2Y7 1883 aaKnown RBP12.16□□□□□ -0.46
CAPN3-220ENST00000569827 LRRK2Q5S007 2527 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 ITGB6P18564 788 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 GPD1P21695 349 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 MMP8P22894 467 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 CCKBRP32239 447 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 MMP12P39900 470 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 PTPN9P43378 593 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 BLKP51451 505 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 MAZP56270 477 aaKnown RBP12.15□□□□□ -0.46
CAPN3-220ENST00000569827 POLR2FP61218 127 aaKnown RBP12.15□□□□□ -0.46
CAPN3-220ENST00000569827 RALGDSQ12967 914 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 PTP4A2Q12974 167 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 C16orf72Q14CZ0 275 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 UGP2Q16851 508 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 AMZ1Q400G9 498 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 MANEAQ5SRI9 462 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 WDR59Q6PJI9 974 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 ARCQ7LC44 396 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 STRADAQ7RTN6 431 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 SPRED1Q7Z699 444 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 SLFN11Q7Z7L1 901 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 FAM114A1Q8IWE2 563 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 MLKLQ8NB16 471 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 GPR156Q8NFN8 814 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 SCG3Q8WXD2 468 aaKnown RBP12.15□□□□□ -0.46
CAPN3-220ENST00000569827 LGR4Q9BXB1 951 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 STK33Q9BYT3 514 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 SUV39H2Q9H5I1 410 aa12.15□□□□□ -0.46
CAPN3-220ENST00000569827 FAM207AQ9NSI2 230 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms