RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	PNPLA3	Q9NST1	481 aa		12.09	□□□□□ -0.47
SPG7-222	ENST00000569820	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820		H7C0C1	242 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	LTF	P02788	710 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	APRT	P07741	180 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	GOT1	P17174	413 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	ARRB2	P32121	409 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	ATP5O	P48047	213 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	PKNOX1	P55347	436 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	GBE1	Q04446	702 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	YWHAH	Q04917	246 aa	Predicted RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	BFSP2	Q13515	415 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	SEPT6	Q14141	434 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	FAM182A	Q5T1J6	154 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	FAXC	Q5TGI0	409 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	NCBP2-AS2	Q69YL0	99 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	CARM1	Q86X55	608 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	SNX32	Q86XE0	403 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	THEM5	Q8N1Q8	247 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	DBF4B	Q8NFT6	615 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	GRIN3A	Q8TCU5	1115 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	LRRC39	Q96DD0	335 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	ZNF597	Q96LX8	424 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	SEZ6L	Q9BYH1	1024 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	COG4	Q9H9E3	785 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	WDR6	Q9NNW5	1121 aa	Known RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	ANLN	Q9NQW6	1124 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	COX16	Q9P0S2	106 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	VPS28	Q9UK41	221 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	MFHAS1	Q9Y4C4	1052 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	BCLAF3	A2AJT9	711 aa	Known RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	C7orf72	A4D263	438 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820		H0YJX3	145 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	CFLAR	O15519	480 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	BMP10	O95393	424 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	RALB	P11234	206 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	COL6A1	P12109	1028 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	HARS2	P49590	506 aa	Known RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	C21orf59	P57076	290 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	TUBA1B	P68363	451 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	MS4A2	Q01362	244 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	TSPY1	Q01534	308 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	SLC10A2	Q12908	348 aa	Predicted RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	NME3	Q13232	169 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	DPYS	Q14117	519 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	E2F2	Q14209	437 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	MAPRE1	Q15691	268 aa	Known RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	TCTN1	Q2MV58	587 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	MGAT5B	Q3V5L5	792 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	PM20D1	Q6GTS8	502 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	TUBA1A	Q71U36	451 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	RNF148	Q8N7C7	305 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	SLC7A14	Q8TBB6	771 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	HM13	Q8TCT9	377 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	ACMSD	Q8TDX5	336 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	C12orf43	Q96C57	262 aa	Known RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	THAP11	Q96EK4	314 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	PGAP3	Q96FM1	320 aa	Predicted RBP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	KLHL32	Q96NJ5	620 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	SLC39A3	Q9BRY0	314 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	TMEM79	Q9BSE2	394 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	CDY1	Q9Y6F8	540 aa		12.08	□□□□□ -0.48
SPG7-222	ENST00000569820	PLXNA3	P51805	1871 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	TTC3	P53804	2025 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	SOBP	A7XYQ1	873 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820		I6L893	689 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	ZNF701	M0R085	212 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	PSMD12	O00232	456 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	PITPNM1	O00562	1244 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	ENPP3	O14638	875 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	KCNN4	O15554	427 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	CNOT3	O75175	753 aa	Known RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	RNASEH2A	O75792	299 aa	Known RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	BCAS2	O75934	225 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	PARN	O95453	639 aa	Known RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	MYC	P01106	439 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	AMH	P03971	560 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	ME2	P23368	584 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	PIK3R1	P27986	724 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	RBL1	P28749	1068 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	OR1G1	P47890	313 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	CSE1L	P55060	971 aa	Known RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	CEACAM7	Q14002	265 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	SLC9B1	Q4ZJI4	515 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	EPGN	Q6UW88	154 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	SCML4	Q8N228	414 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	ADAM32	Q8TC27	787 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	USP13	Q92995	863 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	PLEKHA8	Q96JA3	519 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	DEFB118	Q96PH6	123 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	SLC9A7	Q96T83	725 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	FERMT1	Q9BQL6	677 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	ELAC1	Q9H777	363 aa	Known RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	OLAH	Q9NV23	265 aa		12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.07	□□□□□ -0.48
SPG7-222	ENST00000569820	RGSL1	A5PLK6	1076 aa		12.06	□□□□□ -0.48

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