RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 TRIM72Q6ZMU5 477 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 APTXQ7Z2E3 356 aaKnown RBP8.4□□□□□ -1.06
SNX29-208ENST00000569801 SPATS2Q86XZ4 545 aaKnown RBP8.4□□□□□ -1.06
SNX29-208ENST00000569801 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 MFSD2AQ8NA29 543 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 CHDHQ8NE62 594 aaPredicted RBP8.4□□□□□ -1.06
SNX29-208ENST00000569801 RXFP2Q8WXD0 754 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 SKA1Q96BD8 255 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 SPON2Q9BUD6 331 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 MAGEB5Q9BZ81 275 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 TNKS2Q9H2K2 1166 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 PREBQ9HCU5 417 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 GDF3Q9NR23 364 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 NDFIP2Q9NV92 336 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 ANO10Q9NW15 660 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 TMEM51Q9NW97 253 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 PPARGC1AQ9UBK2 798 aaKnown RBP8.4□□□□□ -1.06
SNX29-208ENST00000569801 LIMA1Q9UHB6 759 aaKnown RBP8.4□□□□□ -1.06
SNX29-208ENST00000569801 NEU3Q9UQ49 428 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 CA5BQ9Y2D0 317 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 DAAM1Q9Y4D1 1078 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 ACTL7AQ9Y615 435 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
SNX29-208ENST00000569801 RYR3Q15413 4870 aa8.4□□□□□ -1.07
SNX29-208ENST00000569801 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 FAM72CH0Y354 149 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 K7EM74 188 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 KPNA3O00505 521 aaPredicted RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 YKT6O15498 198 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 ITGA2BP08514 1039 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 COX6B1P14854 86 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 PCSK6P29122 969 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 SSTR2P30874 369 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 NUDT1P36639 197 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 ACVRL1P37023 503 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 PTPN9P43378 593 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 NSFP46459 744 aaKnown RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 RXRGP48443 463 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 GSCP56915 257 aaPredicted RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 YBX1P67809 324 aaKnown RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 MYL5Q02045 173 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 NRG1Q02297 640 aaPredicted RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 STX1AQ16623 288 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 CLEC16AQ2KHT3 1053 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 SETMARQ53H47 684 aaPredicted RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 FAM72AQ5TYM5 149 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 FAM72DQ6L9T8 149 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 SASS6Q6UVJ0 657 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 DPY19L3Q6ZPD9 716 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 STRADAQ7RTN6 431 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 NLRP14Q86W24 1093 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 FAM72BQ86X60 149 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 PHF13Q86YI8 300 aaPredicted RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 DRC7Q8IY82 874 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 CCDC185Q8N715 623 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 TMEM145Q8NBT3 493 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 TMIEQ8NEW7 156 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 FAM174AQ8TBP5 190 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 FAM172AQ8WUF8 416 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 CENPIQ92674 756 aaPredicted RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 CCDC114Q96M63 670 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 GBP4Q96PP9 640 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 MYOCQ99972 504 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 CEP44Q9C0F1 390 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 ERVMER34-1Q9H9K5 563 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 OR12D3Q9UGF7 316 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 IL36AQ9UHA7 158 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 DMTF1Q9Y222 760 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
SNX29-208ENST00000569801 TRPM6Q9BX84 2022 aa8.39□□□□□ -1.07
SNX29-208ENST00000569801 TDRD6O60522 2096 aaKnown RBP8.38□□□□□ -1.07
SNX29-208ENST00000569801 A0A1W2PQU0 124 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 TCRBV5S1A1TA0A578 114 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 PRAMEF26H0Y7S4 382 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 SLC31A1O15431 190 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 LEFTY1O75610 366 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 LRIG2O94898 1065 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 PRNPP04156 253 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 LIPCP11150 499 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 KRT3P12035 628 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 PRLRP16471 622 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 RHOQP17081 205 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 GPD1P21695 349 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 RFC1P35251 1148 aaPredicted RBP8.38□□□□□ -1.07
SNX29-208ENST00000569801 ARRB1P49407 418 aaPredicted RBP8.38□□□□□ -1.07
SNX29-208ENST00000569801 CCNHP51946 323 aaPredicted RBP8.38□□□□□ -1.07
SNX29-208ENST00000569801 UBXN1Q04323 297 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 BNIP3Q12983 259 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 ZRSR2Q15696 482 aaKnown RBP8.38□□□□□ -1.07
SNX29-208ENST00000569801 ZNF284Q2VY69 593 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 PDLIM3Q53GG5 364 aaPredicted RBP8.38□□□□□ -1.07
SNX29-208ENST00000569801 CARD16Q5EG05 197 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 SFMBT2Q5VUG0 894 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 SEL1L3Q68CR1 1132 aa8.38□□□□□ -1.07
SNX29-208ENST00000569801 RWDD4Q6NW29 188 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms