RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TP53INP2Q8IXH6 220 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 OXR1Q8N573 874 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 TSEN2Q8NCE0 465 aaKnown RBP14.62□□□□□ -0.07
COMMD4-225ENST00000569245 CAPZA3Q96KX2 299 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 CALN1Q9BXU9 219 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 CPEB1Q9BZB8 566 aaKnown RBP14.62□□□□□ -0.07
COMMD4-225ENST00000569245 ERVMER34-1Q9H9K5 563 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 ETNK2Q9NVF9 386 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 KLHL11Q9NVR0 708 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 RCOR3Q9P2K3 495 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-225ENST00000569245 GGT7Q9UJ14 662 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 BTBD3Q9Y2F9 522 aa14.62□□□□□ -0.07
COMMD4-225ENST00000569245 PGRMC1O00264 195 aaKnown RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 YKT6O15498 198 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 CBFA2T3O75081 653 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 TIMP2P16035 220 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 SPINK2P20155 84 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 SERPINB6P35237 376 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 CDKN2BP42772 138 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 PAFAH1B1P43034 410 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 MMRN1Q13201 1228 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 DPYSL3Q14195 570 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 TFDP3Q5H9I0 405 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 CCDC181Q5TID7 509 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 AADACL2Q6P093 401 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF572Q7Z3I7 529 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 SRLQ86TD4 932 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 SPATS2Q86XZ4 545 aaKnown RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 CAMK1DQ8IU85 385 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 CCDC50Q8IVM0 306 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 ATPAF2Q8N5M1 289 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 TMEM145Q8NBT3 493 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 CXorf40AQ8TE69 158 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 NSMCE1Q8WV22 266 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 TSC1Q92574 1164 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 FAF2Q96CS3 445 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 MS4A14Q96JA4 679 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF641Q96N77 438 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 NAP1L3Q99457 506 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF670Q9BS34 389 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 OSBPL8Q9BZF1 889 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 SUV39H2Q9H5I1 410 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 ATP13A3Q9H7F0 1226 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 DKK3Q9UBP4 350 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 SEPT3Q9UH03 358 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 APOBEC2Q9Y235 224 aaKnown RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 KNL1Q8NG31 2342 aa14.61□□□□□ -0.07
COMMD4-225ENST00000569245 NYNRINQ9P2P1 1898 aaKnown RBP14.61□□□□□ -0.07
COMMD4-225ENST00000569245 hCG_1818297A0A087WSY0 165 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 PDE2AO00408 941 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-225ENST00000569245 FPGTO14772 594 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 TRIM16O95361 564 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 FGGP02679 453 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 CD48P09326 243 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 FTH1P19P0C7X4 201 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 ITIH2P19823 946 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 IL4RP24394 825 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 SERPINA4P29622 427 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 SCNN1BP51168 640 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 RENBPP51606 427 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 SHC2P98077 582 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 FGL2Q14314 439 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF235Q14590 738 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 LBRQ14739 615 aaKnown RBP14.6□□□□□ -0.07
COMMD4-225ENST00000569245 CCDC157Q569K6 752 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 TMCO4Q5TGY1 634 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 Q6ZSR6 202 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 PTAR1Q7Z6K3 402 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-225ENST00000569245 BBS5Q8N3I7 341 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 CEP112Q8N8E3 955 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 PNPLA1Q8N8W4 532 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 OR13H1Q8NG92 308 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 HCAR2Q8TDS4 363 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 VOPP1Q96AW1 172 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 ZNF599Q96NL3 588 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 CNTNAP3BQ96NU0 1288 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 TUBGCP5Q96RT8 1024 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 WRAP53Q9BUR4 548 aaKnown RBP14.6□□□□□ -0.07
COMMD4-225ENST00000569245 CNTNAP3Q9BZ76 1288 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 HS3ST3A1Q9Y663 406 aa14.6□□□□□ -0.07
COMMD4-225ENST00000569245 A6NNZ2 444 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 AREL1O15033 823 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 RAD51BO15315 384 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 HYAL3O43820 417 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-225ENST00000569245 MMP20O60882 483 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 TOP3BO95985 862 aaKnown RBP14.59□□□□□ -0.07
COMMD4-225ENST00000569245 RGRP47804 291 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 RXRGP48443 463 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 CSNK1DP48730 415 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 SUOXP51687 545 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 BCL2L1Q07817 233 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 NSUN2Q08J23 767 aaKnown RBP eCLIP14.59□□□□□ -0.07
COMMD4-225ENST00000569245 SLC10A7Q0GE19 358 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 ELP6Q0PNE2 266 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 BNIP3Q12983 259 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 KLF1Q13351 362 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-225ENST00000569245 SHBQ15464 509 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 UGP2Q16851 508 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 LONRF2Q1L5Z9 754 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms