RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PROSCO94903 275 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 CKMT1AP12532 417 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 SERPINA4P29622 427 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 ARL4AP40617 200 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 LIG3P49916 1009 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 AP1S1P61966 158 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDH3-209ENST00000569080 INSM1Q01101 510 aaPredicted RBP7.88□□□□□ -1.15
CDH3-209ENST00000569080 SEMG2Q02383 582 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 ELP6Q0PNE2 266 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 MMRN1Q13201 1228 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 SGCGQ13326 291 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 TRIM14Q14142 442 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 DPYSL3Q14195 570 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 IHHQ14623 411 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 LBRQ14739 615 aaKnown RBP7.88□□□□□ -1.15
CDH3-209ENST00000569080 SKOR2Q2VWA4 1001 aaPredicted RBP7.88□□□□□ -1.15
CDH3-209ENST00000569080 CCDC157Q569K6 752 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 HES3Q5TGS1 186 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 KCTD16Q68DU8 428 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 NCBP2-AS2Q69YL0 99 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 TMCO3Q6UWJ1 677 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 SRLQ86TD4 932 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 TMPRSS12Q86WS5 348 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 FAM181AQ8N9Y4 354 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 CXorf40AQ8TE69 158 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 TBATAQ96M53 351 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 ZNF670Q9BS34 389 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 LRRC61Q9BV99 259 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 ATP13A3Q9H7F0 1226 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 ABHD10Q9NUJ1 306 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 UVRAGQ9P2Y5 699 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 SEPT3Q9UH03 358 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDH3-209ENST00000569080 CSNK1G3Q9Y6M4 447 aa7.88□□□□□ -1.15
CDH3-209ENST00000569080 KNTC1P50748 2209 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 IGSF10Q6WRI0 2623 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CFAP69A5D8W1 941 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 TRABD2BA6NFA1 517 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 MYO1FO00160 1098 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 TOR1BO14657 336 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 SOCS5O75159 536 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 GCATO75600 419 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CELA2BP08218 269 aaPredicted RBP7.87□□□□□ -1.15
CDH3-209ENST00000569080 TMEM253P0C7T8 217 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CDK4P11802 303 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 MYF5P13349 255 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 JUNDP17535 347 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 LHCGRP22888 699 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 MAN1A1P33908 653 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 SERPINB6P35237 376 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 HSPA9P38646 679 aaKnown RBP7.87□□□□□ -1.15
CDH3-209ENST00000569080 SCNN1BP51168 640 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CDH6P55285 790 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 MAXP61244 160 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 YPEL5P62699 121 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 BCL2L1Q07817 233 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 GALNT2Q10471 571 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 TRAF2Q12933 501 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 TBX2Q13207 712 aaPredicted RBP7.87□□□□□ -1.15
CDH3-209ENST00000569080 PAFAH1B3Q15102 231 aaKnown RBP7.87□□□□□ -1.15
CDH3-209ENST00000569080 NFKBIBQ15653 356 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 ATP13A4Q4VNC1 1196 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CDCP2Q5VXM1 449 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 ALG1LQ6GMV1 187 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 DPPA4Q7L190 304 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 PHACTR4Q8IZ21 702 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 PELI3Q8N2H9 469 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 ATPAF2Q8N5M1 289 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 TEX26Q8N6G2 289 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 PQLC3Q8N755 202 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 DCBLD1Q8N8Z6 715 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 PLA2G15Q8NCC3 412 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 RNF214Q8ND24 703 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 OR8K1Q8NGG5 319 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 PCDH19Q8TAB3 1148 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 MAML1Q92585 1016 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 FUBP1Q96AE4 644 aaKnown RBP7.87□□□□□ -1.15
CDH3-209ENST00000569080 APOLD1Q96LR9 279 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 NUDCD1Q96RS6 583 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CHP1Q99653 195 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 BOCQ9BWV1 1114 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 C1QTNF7Q9BXJ2 289 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CLPBQ9H078 707 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 TSPY26PQ9H489 355 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 CCDC86Q9H6F5 360 aaKnown RBP7.87□□□□□ -1.15
CDH3-209ENST00000569080 NOD2Q9HC29 1040 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 B4GALT6Q9UBX8 382 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 APOBEC3BQ9UH17 382 aaKnown RBP7.87□□□□□ -1.15
CDH3-209ENST00000569080 ASXL3Q9C0F0 2248 aa7.87□□□□□ -1.15
CDH3-209ENST00000569080 RP1P56715 2156 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 C3orf70A6NLC5 250 aaPredicted RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 LMO7DNF2Z398 122 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 H3BM21 787 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 TPP1O14773 563 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 AQP9O43315 295 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 CBFA2T2O43439 604 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 FZD6O60353 706 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 RECQL5O94762 991 aaPredicted RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 MTA2O94776 668 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms