RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 C9orf47Q6ZRZ4 202 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 MON1BQ7L1V2 547 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 NOC3LQ8WTT2 800 aaKnown RBP4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 ADAMTS14Q8WXS8 1223 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 ERGIC1Q969X5 290 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 INTS12Q96CB8 462 aaKnown RBP4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 BBS4Q96RK4 519 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 GFM1Q96RP9 751 aaKnown RBP4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 H2AFJQ9BTM1 129 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 KCNN2Q9H2S1 579 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 MAGEE1Q9HCI5 957 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 SMYD2Q9NRG4 433 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 BLOC1S4Q9NUP1 217 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 PLK2Q9NYY3 685 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 SLC45A1Q9Y2W3 748 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 ADAM18Q9Y3Q7 739 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 PTGDR2Q9Y5Y4 395 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 SQORQ9Y6N5 450 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 ITIH6Q6UXX5 1313 aa4.96□□□□□ -1.62
SHCBP1-206ENST00000567698 IGHV4-28A0A0C4DH34 117 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 TYW5A2RUC4 315 aaKnown RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 SEC14L5O43304 696 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 PCNAP12004 261 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 LAMP2P13473 410 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 PSMA4P25789 261 aaKnown RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 HOXA11P31270 313 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 PIP4K2AP48426 406 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 CTCFP49711 727 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 GNAQP50148 359 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 OLR1P78380 273 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 CEBPZQ03701 1054 aaKnown RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 ST3GAL1Q11201 340 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 PPP2R5BQ15173 497 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 RALBP1Q15311 655 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 C2orf68Q2NKX9 166 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 ZNF260Q3ZCT1 412 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 CXorf66Q5JRM2 361 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 FNBP1LQ5T0N5 605 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 CYP20A1Q6UW02 462 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 NEK10Q6ZWH5 1172 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 MTSS1LQ765P7 747 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 ADSSL1Q8N142 457 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 ETNPPLQ8TBG4 499 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 OIT3Q8WWZ8 545 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 FBXL8Q96CD0 374 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 ZC3HAV1LQ96H79 300 aaKnown RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 CHCHD6Q9BRQ6 235 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 SPRY4Q9C004 299 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 RBM38Q9H0Z9 239 aaKnown RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 MUC13Q9H3R2 512 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 POLR1BQ9H9Y6 1135 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 SLC6A13Q9NSD5 602 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 TMEM51Q9NW97 253 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM96BQ9Y3D0 163 aa4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 SRPRBQ9Y5M8 271 aaKnown RBP4.95□□□□□ -1.62
SHCBP1-206ENST00000567698 RUSC2Q8N2Y8 1516 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 PI4KAP2A4QPH2 592 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM90A10PA6NDY2 464 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 USP17L23D6RBM5 183 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 WNT9BO14905 357 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 BCAT2O15382 392 aaPredicted RBP4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 MMP2P08253 660 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 CBSLP0DN79 551 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 TFPIP10646 304 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 CHMP24386 653 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 CHATP28329 748 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 TM4SF1P30408 202 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 CBSP35520 551 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 PIGAP37287 484 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 PGGT1BP53609 377 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 COL28A1Q2UY09 1125 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 DNTTIP2Q5QJE6 756 aaKnown RBP4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 HYIQ5T013 277 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 PLEKHA7Q6IQ23 1121 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 CPLX2Q6PUV4 134 aaKnown RBP4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 LCTLQ6UWM7 567 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 NGEFQ8N5V2 710 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 AADATQ8N5Z0 425 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 TMEM116Q8NCL8 245 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 B4GALNT2Q8NHY0 566 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 MMABQ96EY8 250 aaPredicted RBP4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 WDFY2Q96P53 400 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 SIN3AQ96ST3 1273 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 MAP7D2Q96T17 732 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 C1QTNF5Q9BXJ0 243 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 DCLK3Q9C098 648 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 ZHX3Q9H4I2 956 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 MKKSQ9NPJ1 570 aaPredicted RBP4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 ASAH2Q9NR71 780 aa4.94□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM90A8PA6NJQ4 464 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 KDM4EB2RXH2 506 aaPredicted RBP4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 PTP4A3O75365 173 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 NTN1O95631 604 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM90A13PP0C7W8 464 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM90A24PP0C7X0 464 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 IRF1P10914 325 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 NAGAP17050 411 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 MXI1P50539 228 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 EIF5P55010 431 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms