RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 BCAS2O75934 225 aaPredicted RBP9.37□□□□□ -0.91
BBS4-210ENST00000566400 PEX11BO96011 259 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 OGNP20774 298 aaKnown RBP9.37□□□□□ -0.91
BBS4-210ENST00000566400 ALDH1A3P47895 512 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 ACADVLP49748 655 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 STX1BP61266 288 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 ACVR1Q04771 509 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 DSC1Q08554 894 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 TRAP1Q12931 704 aaKnown RBP9.37□□□□□ -0.91
BBS4-210ENST00000566400 PDCD2Q16342 344 aaPredicted RBP9.37□□□□□ -0.91
BBS4-210ENST00000566400 PCSK7Q16549 785 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 MS4A13Q5J8X5 152 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 PIK3R6Q5UE93 754 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 IRAK1BP1Q5VVH5 260 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 RGMBQ6NW40 437 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 HASPINQ8TF76 798 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 C2orf15Q8WU43 125 aaKnown RBP9.37□□□□□ -0.91
BBS4-210ENST00000566400 TADA1Q96BN2 335 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 RCN3Q96D15 328 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 ASB9Q96DX5 294 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 CATSPER2Q96P56 530 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 PGLYRP2Q96PD5 576 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 TMEM209Q96SK2 561 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 EFHD1Q9BUP0 239 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 SHCBP1LQ9BZQ2 653 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 YIPF3Q9GZM5 350 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 NMUR1Q9HB89 426 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 PFDN4Q9NQP4 134 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 VPS9D1Q9Y2B5 631 aa9.37□□□□□ -0.91
BBS4-210ENST00000566400 COPG1Q9Y678 874 aaKnown RBP9.37□□□□□ -0.91
BBS4-210ENST00000566400 ZNF638Q14966 1978 aaKnown RBP9.37□□□□□ -0.91
BBS4-210ENST00000566400 PTPRDP23468 1912 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CCDC78A2IDD5 438 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 A8MT66 165 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SDHDO14521 159 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 UBDO15205 165 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 DENRO43583 198 aaKnown RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 GLP2RO95838 553 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CCDC166P0CW27 439 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 VCLP18206 1134 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CES1P23141 567 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 YWHAQP27348 245 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CD86P42081 329 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ITGA7Q13683 1181 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 PTK2BQ14289 1009 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 POLD3Q15054 466 aaPredicted RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 GRAMD1BQ3KR37 738 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SPATS1Q496A3 300 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 NOMO2Q5JPE7 1267 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ZNF280DQ6N043 979 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CUZD1Q86UP6 607 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ZNF354CQ86Y25 554 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ZNF683Q8IZ20 524 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 TXNDC5Q8NBS9 432 aaKnown RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 KLHDC9Q8NEP7 349 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 RHEBL1Q8TAI7 183 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SPPL2BQ8TCT7 592 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ZFAND2BQ8WV99 257 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ROPN1LQ96C74 230 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 PABPC5Q96DU9 382 aaKnown RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SYTL2Q9HCH5 934 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 MPP6Q9NZW5 540 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SLC2A6Q9UGQ3 507 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ADAMTS6Q9UKP5 1117 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SARDHQ9UL12 918 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 TMCO1Q9UM00 188 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 H3BNX3 289 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 VPS4BO75351 444 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ENO3P13929 434 aaPredicted RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 GMPRP36959 345 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 VEGFBP49765 207 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 USP46P62068 366 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SULT2A1Q06520 285 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ELAVL2Q12926 359 aaKnown RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 DLG1Q12959 904 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 GRM2Q14416 872 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ZNF235Q14590 738 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 KCNA10Q16322 511 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CST9Q5W186 159 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 PRMT9Q6P2P2 845 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CNSTQ6PJW8 725 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SLC30A9Q6PML9 568 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 EFL1Q7Z2Z2 1120 aaKnown RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 C14orf80Q86SX3 495 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 MFSD6LQ8IWD5 586 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 CLYBLQ8N0X4 340 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.36□□□□□ -0.91
BBS4-210ENST00000566400 PCYOX1LQ8NBM8 494 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 OR6P1Q8NGX9 317 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 BRSK1Q8TDC3 778 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 HMCESQ96FZ2 354 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 SPATA17Q96L03 361 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 LBHD1Q9BQE6 289 aaPredicted RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 EBF3Q9H4W6 596 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 NDFIP2Q9NV92 336 aa9.36□□□□□ -0.91
BBS4-210ENST00000566400 INTS10Q9NVR2 710 aaKnown RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 ARIH1Q9Y4X5 557 aaPredicted RBP9.36□□□□□ -0.91
BBS4-210ENST00000566400 SHROOM3Q8TF72 1996 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms