RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	PIP4K2C	Q8TBX8	421 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	NTAN1	Q96AB6	310 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	C1orf74	Q96LT6	269 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	MCEE	Q96PE7	176 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	NOX5	Q96PH1	765 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	HAPLN3	Q96S86	360 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	AGPAT1	Q99943	283 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	NUP58	Q9BVL2	599 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	NUSAP1	Q9BXS6	441 aa	Known RBP	6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	TMPRSS13	Q9BYE2	586 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	BTBD1	Q9H0C5	482 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	PCED1A	Q9H1Q7	454 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	TNKS2	Q9H2K2	1166 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	WDCP	Q9H6R7	721 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	PDF	Q9HBH1	243 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	TMEM248	Q9NWD8	314 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	GPATCH2L	Q9NWQ4	482 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	KCNK4	Q9NYG8	393 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	RRN3	Q9NYV6	651 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	PCOLCE2	Q9UKZ9	415 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	FZD4	Q9ULV1	537 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	STAP1	Q9ULZ2	295 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	ATRX	P46100	2492 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	FER1L5	A0AVI2	2057 aa		6.59	□□□□□ -1.35
TCF4-233	ENST00000566376	CASC3	O15234	703 aa	Known RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	RAD51B	O15315	384 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	NDUFS2	O75306	463 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	RNASEH2A	O75792	299 aa	Known RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	FSBP	O95073	299 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	DNTT	P04053	509 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	GYPC	P04921	128 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	RHOC	P08134	193 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ZNF883	P0CG24	379 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SLC2A3	P11169	496 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	CEACAM1	P13688	526 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	GPD1	P21695	349 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	C5AR1	P21730	350 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	CD27	P26842	260 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	IL1R2	P27930	398 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	OXTR	P30559	389 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	STAT1	P42224	750 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	RGR	P47804	291 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	IL9R	Q01113	521 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	BYSL	Q13895	437 aa	Known RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	IHH	Q14623	411 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	KLHL40	Q2TBA0	621 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SFMBT2	Q5VUG0	894 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SEL1L3	Q68CR1	1132 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SASS6	Q6UVJ0	657 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	TRIM72	Q6ZMU5	477 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	LEKR1	Q6ZMV7	388 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	GCNT7	Q6ZNI0	430 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	GLRX5	Q86SX6	157 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SETD3	Q86TU7	594 aa	Predicted RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	PDZD3	Q86UT5	571 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	DRC7	Q8IY82	874 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	HDDC3	Q8N4P3	179 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ZNF557	Q8N988	423 aa	Predicted RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	PHC3	Q8NDX5	983 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	NEK11	Q8NG66	645 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	OR2T34	Q8NGX1	318 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	OR6K2	Q8NGY2	324 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	CEP76	Q8TAP6	659 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SNX19	Q92543	992 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ARHGEF2	Q92974	986 aa	Known RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ARHGEF26	Q96DR7	871 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SPAG5	Q96R06	1193 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	DDX50	Q9BQ39	737 aa	Known RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SCNM1	Q9BWG6	230 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	NRSN2	Q9GZP1	204 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	OSBPL2	Q9H1P3	480 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	HAUS4	Q9H6D7	363 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	GAREM1	Q9H706	876 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	LRRC19	Q9H756	370 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SYNC	Q9H7C4	482 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	SGK2	Q9HBY8	427 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	FZD3	Q9NPG1	666 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	TM7SF3	Q9NS93	570 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ADAM22	Q9P0K1	906 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	PPARGC1A	Q9UBK2	798 aa	Known RBP	6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	LHX3	Q9UBR4	397 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	VPS28	Q9UK41	221 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	FZD10	Q9ULW2	581 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	PLA2G4C	Q9UP65	541 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ITM2B	Q9Y287	266 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ANKRD6	Q9Y2G4	727 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	HIF3A	Q9Y2N7	669 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	DAAM1	Q9Y4D1	1078 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	CEP83	Q9Y592	693 aa		6.58	□□□□□ -1.36
TCF4-233	ENST00000566376	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	LY6G6E	A0A0G2JKS1	128 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376		A0A1B0GTQ1	180 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376		A0A1W2PQC6	194 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	ILVBL	A1L0T0	632 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	TYW5	A2RUC4	315 aa	Known RBP	6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	FAM221B	A6H8Z2	402 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	SIGLEC16	A6NMB1	481 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	TAF4	O00268	1085 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	MUSK	O15146	869 aa		6.57	□□□□□ -1.36
TCF4-233	ENST00000566376	VILL	O15195	856 aa		6.57	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms