RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CUZD1Q86UP6 607 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 FIBCD1Q8N539 461 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 PCDH20Q8N6Y1 951 aaKnown RBP21.74■■□□□ 1.07
SPSB3-208ENST00000566339 HEXDCQ8WVB3 486 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 CNDP2Q96KP4 475 aaKnown RBP21.74■■□□□ 1.07
SPSB3-208ENST00000566339 ULBP1Q9BZM6 244 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 GLOD4Q9HC38 313 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 DUS2Q9NX74 493 aaKnown RBP21.74■■□□□ 1.07
SPSB3-208ENST00000566339 COX16Q9P0S2 106 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 ABCD2Q9UBJ2 740 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 MAGED2Q9UNF1 606 aaPredicted RBP21.74■■□□□ 1.07
SPSB3-208ENST00000566339 SNX13Q9Y5W8 968 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 TNPO2O14787 897 aaKnown RBP21.73■■□□□ 1.07
SPSB3-208ENST00000566339 GPR32O75388 356 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 FCGR1AP12314 374 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 HSD17B1P14061 328 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 DARSP14868 501 aaKnown RBP21.73■■□□□ 1.07
SPSB3-208ENST00000566339 CPB1P15086 417 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 ADRA1AP35348 466 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 AVPR1AP37288 418 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 LILRA4P59901 499 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 ATP6V0D1P61421 351 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 MPP1Q00013 466 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 NRF1Q16656 503 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 MOB2Q70IA6 237 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 GPR141Q7Z602 305 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 NETO2Q8NC67 525 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 RNF169Q8NCN4 708 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 TSPEARQ8WU66 669 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 NDRG1Q92597 394 aaKnown RBP21.73■■□□□ 1.07
SPSB3-208ENST00000566339 L3HYPDHQ96EM0 354 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 MARK4Q96L34 752 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 PGLYRP2Q96PD5 576 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 APOL2Q9BQE5 337 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 OSBPL6Q9BZF3 934 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 WDCPQ9H6R7 721 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 CAAP1Q9H8G2 361 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 FBXO5Q9UKT4 447 aa21.73■■□□□ 1.07
SPSB3-208ENST00000566339 SMIM35A0A1B0GVV1 85 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 SAT1P21673 171 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 NFKB2Q00653 900 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 MTX3Q5HYI7 312 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 DENND5AQ6IQ26 1287 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 TIGD7Q6NT04 549 aaPredicted RBP21.72■■□□□ 1.07
SPSB3-208ENST00000566339 HMBOX1Q6NT76 420 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 HFE2Q6ZVN8 426 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 FASTKD5Q7L8L6 764 aaKnown RBP21.72■■□□□ 1.07
SPSB3-208ENST00000566339 TMEM86AQ8N2M4 240 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 FEM1CQ96JP0 617 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 GPATCH1Q9BRR8 931 aaKnown RBP21.72■■□□□ 1.07
SPSB3-208ENST00000566339 C9orf16Q9BUW7 83 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 CDHR5Q9HBB8 845 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 TBC1D13Q9NVG8 400 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 DDIT4Q9NX09 232 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 WBP1LQ9NX94 342 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 FNIP2Q9P278 1114 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 OR12D3Q9UGF7 316 aa21.72■■□□□ 1.07
SPSB3-208ENST00000566339 SH3PXD2BA1X283 911 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 A8MT66 165 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 NRP1O14786 923 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 HOXB8P17481 243 aaPredicted RBP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 TCN1P20061 433 aaPredicted RBP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 IMPDH1P20839 514 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ARNTP27540 789 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 SLC1A2P43004 574 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 NDUFV1P49821 464 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ZNF792Q3KQV3 632 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 RGMBQ6NW40 437 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 LARP4Q71RC2 724 aaKnown RBP eCLIP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 MINDY1Q8N5J2 469 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 MED10Q9BTT4 135 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 PCDHAC1Q9H158 963 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 NXF3Q9H4D5 531 aaKnown RBP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 GJD2Q9UKL4 321 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 FGF10O15520 208 aaPredicted RBP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 LRIG2O94898 1065 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 PAPSS2O95340 614 aaPredicted RBP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 IL10P22301 178 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 HOXC13P31276 330 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 LEPRP48357 1165 aaKnown RBP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 LHX1P48742 406 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ZNF157P51786 506 aaPredicted RBP21.71■■□□□ 1.07
SPSB3-208ENST00000566339 PRKCQQ04759 706 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ZNF618Q5T7W0 954 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 LCN8Q6JVE9 175 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ZNF554Q86TJ5 538 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ZNF354CQ86Y25 554 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 MFSD6LQ8IWD5 586 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 KLHL23Q8NBE8 558 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 FAM156AQ8NDB6 213 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 SLC29A1Q99808 456 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 KATNBL1Q9H079 304 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ARNT2Q9HBZ2 717 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ANLNQ9NQW6 1124 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 ARHGEF38Q9NXL2 777 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 TRAF6Q9Y4K3 522 aa21.71■■□□□ 1.07
SPSB3-208ENST00000566339 TANC1Q9C0D5 1861 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 TMEM233B4DJY2 109 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 I6L893 689 aaPredicted RBP21.7■■□□□ 1.06
SPSB3-208ENST00000566339 MATN3O15232 486 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms