RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 FOXP3Q9BZS1 431 aa7.84□□□□□ -1.15
CDH1-208ENST00000565810 MKRN2Q9H000 416 aaKnown RBP7.84□□□□□ -1.15
CDH1-208ENST00000565810 TSPYL1Q9H0U9 437 aa7.84□□□□□ -1.15
CDH1-208ENST00000565810 GDF3Q9NR23 364 aa7.84□□□□□ -1.15
CDH1-208ENST00000565810 SPATA6Q9NWH7 488 aaPredicted RBP7.84□□□□□ -1.15
CDH1-208ENST00000565810 FBXL12Q9NXK8 326 aa7.84□□□□□ -1.15
CDH1-208ENST00000565810 BFARQ9NZS9 450 aa7.84□□□□□ -1.15
CDH1-208ENST00000565810 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDH1-208ENST00000565810 SARDHQ9UL12 918 aa7.84□□□□□ -1.15
CDH1-208ENST00000565810 V9GYY5 206 aaPredicted RBP7.84□□□□□ -1.15
CDH1-208ENST00000565810 DOCK4Q8N1I0 1966 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TCF20Q9UGU0 1960 aaKnown RBP7.83□□□□□ -1.16
CDH1-208ENST00000565810 A0A0J9YYE9 177 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 A0A1W2PP55 124 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TCRBV7S3A2A0A539 114 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TSPAN11A1L157 253 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 UPK3BL1B0FP48 263 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 UPK3BL2E5RIL1 263 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 SLC7A4O43246 635 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 LAMTOR5O43504 91 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 PI15O43692 258 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 PPFIA2O75334 1257 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ZNF217O75362 1048 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TMEM63AO94886 807 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 PRLP01236 227 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TRBC1P01850 177 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 PDHA1P08559 390 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ATXN1LP0C7T5 689 aaKnown RBP7.83□□□□□ -1.16
CDH1-208ENST00000565810 ADRB3P13945 408 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TIMP2P16035 220 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 CTPS1P17812 591 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 NDUFV2P19404 249 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 OXTRP30559 389 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 SESN2P58004 480 aaPredicted RBP7.83□□□□□ -1.16
CDH1-208ENST00000565810 FAM193AP78312 1265 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ELP6Q0PNE2 266 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 CNTN1Q12860 1018 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ARHGEF7Q14155 803 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 IHHQ14623 411 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 HIF1AQ16665 826 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 QPCTQ16769 361 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ERCC6LQ2NKX8 1250 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 SIRPB2Q5JXA9 342 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.83□□□□□ -1.16
CDH1-208ENST00000565810 USP30Q70CQ3 517 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 CENPUQ71F23 418 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 BMP8AQ7Z5Y6 402 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 FBXL6Q8N531 539 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 GPR161Q8N6U8 529 aaKnown RBP7.83□□□□□ -1.16
CDH1-208ENST00000565810 OR52K1Q8NGK4 314 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 BLOC1S5Q8TDH9 187 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 PIH1D2Q8WWB5 315 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 SPOCK2Q92563 424 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ART4Q93070 314 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ARRDC3Q96B67 414 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 SCRN2Q96FV2 425 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 NSMCE3Q96MG7 304 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 SERPINB12Q96P63 405 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 HHIPQ96QV1 700 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TRIB3Q96RU7 358 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 IL22Q9GZX6 179 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 PABPC3Q9H361 631 aaKnown RBP7.83□□□□□ -1.16
CDH1-208ENST00000565810 TRABDQ9H4I3 376 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 ARNT2Q9HBZ2 717 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 CASS4Q9NQ75 786 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 POLR3BQ9NW08 1133 aaPredicted RBP7.83□□□□□ -1.16
CDH1-208ENST00000565810 HACD3Q9P035 362 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 PPIL1Q9Y3C6 166 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 TICRRQ7Z2Z1 1910 aa7.83□□□□□ -1.16
CDH1-208ENST00000565810 MAGEB16A2A368 324 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 SDR42E2A6NKP2 422 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 C2orf81A6NN90 581 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 EIF3HO15372 352 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDH1-208ENST00000565810 PAPSS2O95340 614 aaPredicted RBP7.82□□□□□ -1.16
CDH1-208ENST00000565810 CRTAMO95727 393 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 C7P10643 843 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 TPH1P17752 444 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 GABRG2P18507 467 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ADRA1DP25100 572 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 VIPR1P32241 457 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 HNF1BP35680 557 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 GRIA1P42261 906 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ABL2P42684 1182 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 CHRNA4P43681 627 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 CARSP49589 748 aaKnown RBP7.82□□□□□ -1.16
CDH1-208ENST00000565810 PDE1BQ01064 536 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 OLIG2Q13516 323 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 BBS9Q3SYG4 887 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ARMC3Q5W041 872 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 CASC4Q6P4E1 433 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 PARS2Q7L3T8 475 aaKnown RBP7.82□□□□□ -1.16
CDH1-208ENST00000565810 NLRP9Q7RTR0 991 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 GLT6D1Q7Z4J2 308 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ZSWIM9Q86XI8 627 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 C1orf210Q8IVY1 113 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ZCCHC9Q8N567 271 aaKnown RBP7.82□□□□□ -1.16
CDH1-208ENST00000565810 EIF1ADQ8N9N8 165 aaKnown RBP7.82□□□□□ -1.16
CDH1-208ENST00000565810 PPHLN1Q8NEY8 458 aaKnown RBP7.82□□□□□ -1.16
CDH1-208ENST00000565810 OR14C36Q8NHC7 312 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 FBXO25Q8TCJ0 367 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms