RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 KAT14Q9H8E8 782 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 KIF9Q9HAQ2 790 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 SMYD2Q9NRG4 433 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 PLK2Q9NYY3 685 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 DLGAP2Q9P1A6 1054 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 ZNF215Q9UL58 517 aaPredicted RBP4.87□□□□□ -1.63
LINC00560-201ENST00000564593 BTBD3Q9Y2F9 522 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 HS3ST3B1Q9Y662 390 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 A3GALT2U3KPV4 340 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 PCSK5Q92824 1860 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 A0A0U1RQF3 1178 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 A0A1W2PQF6 199 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 A0A1W2PRG0 241 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 CENPBP07199 599 aaPredicted RBP4.87□□□□□ -1.63
LINC00560-201ENST00000564593 HSP90AA1P07900 732 aaKnown RBP4.87□□□□□ -1.63
LINC00560-201ENST00000564593 ETFAP13804 333 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 TM4SF1P30408 202 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 DCTDP32321 178 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 ME1P48163 572 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 SSBP2P81877 361 aaPredicted RBP4.87□□□□□ -1.63
LINC00560-201ENST00000564593 MC1RQ01726 317 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 FAM27E3Q08E93 113 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 OLIG2Q13516 323 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 CUL4AQ13619 759 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 CRYMQ14894 314 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 SOWAHAQ2M3V2 549 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 RILPL1Q5EBL4 403 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 Q5PR19 223 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 KLHL35Q6PF15 583 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 LCTLQ6UWM7 567 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 PARP16Q8N5Y8 322 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 ARFGAP1Q8N6T3 406 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 TEX45Q8NA69 505 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 ENGASEQ8NFI3 743 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 OTULINQ96BN8 352 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 MAGEE1Q9HCI5 957 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 RRP7BPQ9NSQ0 103 aa4.87□□□□□ -1.63
LINC00560-201ENST00000564593 ADD3Q9UEY8 706 aaKnown RBP4.87□□□□□ -1.63
LINC00560-201ENST00000564593 CHL1O00533 1208 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 KLK8O60259 260 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 MTA2O94776 668 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 RGS11O94810 467 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 EPN2O95208 641 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 IPO7O95373 1038 aaKnown RBP4.86□□□□□ -1.63
LINC00560-201ENST00000564593 CBSLP0DN79 551 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 PRF1P14222 555 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 SHMT1P34896 483 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 CBSP35520 551 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 ABCG1P45844 678 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 PRAMEP78395 509 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 CREB5Q02930 508 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 NIPAL4Q0D2K0 466 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 DRAP1Q14919 205 aaPredicted RBP4.86□□□□□ -1.63
LINC00560-201ENST00000564593 WTAPQ15007 396 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 DUSP6Q16828 381 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 WASHC2DQ5SRD0 308 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 TMEM154Q6P9G4 183 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 PARM1Q6UWI2 310 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 PIP4P1Q86T03 277 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 PALB2Q86YC2 1186 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 MMP21Q8N119 569 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 GABPB2Q8TAK5 448 aaPredicted RBP4.86□□□□□ -1.63
LINC00560-201ENST00000564593 SNAPC3Q92966 411 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 NSUN4Q96CB9 384 aaKnown RBP4.86□□□□□ -1.63
LINC00560-201ENST00000564593 FBXL8Q96CD0 374 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 GFM1Q96RP9 751 aaKnown RBP4.86□□□□□ -1.63
LINC00560-201ENST00000564593 TKTL2Q9H0I9 626 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 SMARCAD1Q9H4L7 1026 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 SH2D4AQ9H788 454 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 ABI3Q9P2A4 366 aa4.86□□□□□ -1.63
LINC00560-201ENST00000564593 FRMD3A2A2Y4 597 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 AGAP20933 346 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 F2RL1P55085 397 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 NLRP5P59047 1200 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 KCTD2Q14681 263 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 RABEP1Q15276 862 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 PXDC1Q5TGL8 231 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
LINC00560-201ENST00000564593 FBXO46Q6PJ61 603 aaPredicted RBP4.85□□□□□ -1.63
LINC00560-201ENST00000564593 SARM1Q6SZW1 724 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 TRILQ7L0X0 811 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 TMEM199Q8N511 208 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 DENND1AQ8TEH3 1009 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 LPAR1Q92633 364 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 INPP5DQ92835 1189 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 FAM120BQ96EK7 910 aaKnown RBP4.85□□□□□ -1.63
LINC00560-201ENST00000564593 ISCUQ9H1K1 167 aa4.85□□□□□ -1.63
LINC00560-201ENST00000564593 SIRT3Q9NTG7 399 aaPredicted RBP4.85□□□□□ -1.63
LINC00560-201ENST00000564593 CNOT8Q9UFF9 292 aaKnown RBP4.85□□□□□ -1.63
LINC00560-201ENST00000564593 FAM237AA0A1B0GTK4 181 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 hCG_1807616A0A1W2PRN6 198 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 FIBPO43427 364 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 AHCYL1O43865 530 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 TSPAN9O75954 239 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 IL7RP16871 459 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 MYF6P23409 242 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 RASSF2P50749 326 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 SELENOVP59797 346 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 SRSF1Q07955 248 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 CHAF1BQ13112 559 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms