RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 SERPINA4P29622 427 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 ABCG1P45844 678 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 MAXP61244 160 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 BCL2L1Q07817 233 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 NSUN2Q08J23 767 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERC2-206ENST00000564519 RALGDSQ12967 914 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 EIF2B5Q13144 721 aaKnown RBP12.78□□□□□ -0.36
HERC2-206ENST00000564519 GRM3Q14832 879 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 IRF4Q15306 451 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
HERC2-206ENST00000564519 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 CFAP58Q5T655 872 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 NCBP2-AS2Q69YL0 99 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 BRAT1Q6PJG6 821 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 LRRC69Q6ZNQ3 347 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 NYAP1Q6ZVC0 841 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 TMPRSS12Q86WS5 348 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 ATPAF2Q8N5M1 289 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 FAM174AQ8TBP5 190 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 TCEAL2Q9H3H9 227 aaPredicted RBP12.78□□□□□ -0.36
HERC2-206ENST00000564519 ATP13A3Q9H7F0 1226 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
HERC2-206ENST00000564519 ATP8A1Q9Y2Q0 1164 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 DSPP15924 2871 aaKnown RBP12.78□□□□□ -0.36
HERC2-206ENST00000564519 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 A8MX80 341 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 AKR1B15C9JRZ8 316 aaPredicted RBP12.77□□□□□ -0.37
HERC2-206ENST00000564519 RFPL3O75679 317 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 CSF2P04141 144 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 TPM1P09493 284 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 SERPINB6P35237 376 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 MMP12P39900 470 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 LIG3P49916 1009 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 SUOXP51687 545 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 AP1S1P61966 158 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 ELP6Q0PNE2 266 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 ZNF235Q14590 738 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 MESDQ14696 234 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
HERC2-206ENST00000564519 WSCD2Q2TBF2 565 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 ANKRD20A8PQ5CZ79 823 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 ERAP2Q6P179 960 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 SARM1Q6SZW1 724 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 PARGQ86W56 976 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 DCP2Q8IU60 420 aaKnown RBP12.77□□□□□ -0.37
HERC2-206ENST00000564519 RBFAQ8N0V3 343 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 PQLC3Q8N755 202 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 KCTD6Q8NC69 237 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 RAPGEF5Q92565 580 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 NXPE2Q96DL1 559 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 IFT43Q96FT9 208 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 CCDC42Q96M95 316 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 MGME1Q9BQP7 344 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 NOD2Q9HC29 1040 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 PCDHGC4Q9Y5F7 938 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 AK5Q9Y6K8 562 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 NBEAQ8NFP9 2946 aa12.77□□□□□ -0.37
HERC2-206ENST00000564519 CABIN1Q9Y6J0 2220 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
HERC2-206ENST00000564519 NME1P15531 152 aaKnown RBP12.76□□□□□ -0.37
HERC2-206ENST00000564519 GM2AP17900 193 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 MAN1A1P33908 653 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 MMP13P45452 471 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 RENBPP51606 427 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 GBE1Q04446 702 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 GALNT2Q10471 571 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 TRAF2Q12933 501 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 ZNF211Q13398 564 aaPredicted RBP12.76□□□□□ -0.37
HERC2-206ENST00000564519 PAFAH1B3Q15102 231 aaKnown RBP12.76□□□□□ -0.37
HERC2-206ENST00000564519 PTPRRQ15256 657 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 FAM182AQ5T1J6 154 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 CNGA4Q8IV77 575 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 TC2NQ8N9U0 490 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 ZNF548Q8NEK5 533 aaPredicted RBP12.76□□□□□ -0.37
HERC2-206ENST00000564519 OR4C6Q8NH72 309 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 FAF2Q96CS3 445 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 NUDCD1Q96RS6 583 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 ZNF670Q9BS34 389 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 TRIM5Q9C035 493 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 HYOU1Q9Y4L1 999 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 COL5A1P20908 1838 aaPredicted RBP12.76□□□□□ -0.37
HERC2-206ENST00000564519 TP53BP1Q12888 1972 aaPredicted RBP12.76□□□□□ -0.37
HERC2-206ENST00000564519 ZFYVE26Q68DK2 2539 aa12.76□□□□□ -0.37
HERC2-206ENST00000564519 A0A087WV48 116 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 LY6G6EA0A0G2JKS1 128 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 K7ESM1 405 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 HTRA2O43464 458 aaPredicted RBP12.75□□□□□ -0.37
HERC2-206ENST00000564519 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
HERC2-206ENST00000564519 PCCBP05166 539 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 KRT7P08729 469 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 C1SP09871 688 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 JUNDP17535 347 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 CKMT2P17540 419 aa12.75□□□□□ -0.37
HERC2-206ENST00000564519 HSPA9P38646 679 aaKnown RBP12.75□□□□□ -0.37
HERC2-206ENST00000564519 GARSP41250 739 aaKnown RBP12.75□□□□□ -0.37
HERC2-206ENST00000564519 HNRNPKP61978 463 aaKnown RBP eCLIP12.75□□□□□ -0.37
HERC2-206ENST00000564519 SLC10A2Q12908 348 aaPredicted RBP12.75□□□□□ -0.37
HERC2-206ENST00000564519 IHHQ14623 411 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms