RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 MAP3K6O95382 1288 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 JUNDP17535 347 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 RENBPP51606 427 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 MAXP61244 160 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 DAB2P98082 770 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 NSUN2Q08J23 767 aaKnown RBP eCLIP25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 TSR1Q2NL82 804 aaKnown RBP25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 WSCD2Q2TBF2 565 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 HS1BP3Q53T59 392 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 MDM1Q8TC05 714 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 FAM71BQ8TC56 605 aa25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 TCEAL2Q9H3H9 227 aaPredicted RBP25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 PNMA8BQ9ULN7 279 aaPredicted RBP25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 ARID1BQ8NFD5 2236 aaPredicted RBP25.46■■□□□ 1.67
AC009041.3-201ENST00000564390 H3BM21 787 aa25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 TRAFD1O14545 582 aaPredicted RBP25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 TMEM253P0C7T8 217 aa25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 RALGDSQ12967 914 aa25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 LRRC14Q15048 493 aa25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 HES3Q5TGS1 186 aa25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 NCBP2-AS2Q69YL0 99 aa25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 NHEJ1Q9H9Q4 299 aaPredicted RBP25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 NLGN3Q9NZ94 848 aa25.45■■□□□ 1.66
AC009041.3-201ENST00000564390 FREM2Q5SZK8 3169 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 SRRM3A6NNA2 597 aaPredicted RBP25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 A8MX80 341 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 SCAMP1O15126 338 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 LZTS3O60299 673 aaPredicted RBP25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 CAPNS1P04632 268 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 PCCBP05166 539 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 C1SP09871 688 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 ALPPL2P10696 532 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 ACP1P24666 158 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 MESDQ14696 234 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 KCTD6Q8NC69 237 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 PCDH19Q8TAB3 1148 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 LMX1AQ8TE12 382 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 PDCD6IPQ8WUM4 868 aaKnown RBP25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 MGME1Q9BQP7 344 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 NOD2Q9HC29 1040 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 SCUBE2Q9NQ36 999 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 APOBEC3BQ9UH17 382 aaKnown RBP25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 PCDHGC4Q9Y5F7 938 aa25.44■■□□□ 1.66
AC009041.3-201ENST00000564390 K7ESM1 405 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 AQP9O43315 295 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 CR2P20023 1033 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 HSPA9P38646 679 aaKnown RBP25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 MMP13P45452 471 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 YPEL5P62699 121 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 CAMK2BQ13554 666 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 PTK2BQ14289 1009 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 DEFB133Q30KQ1 61 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 ANKRD20A8PQ5CZ79 823 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 ZFYVE27Q5T4F4 411 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 MACC1Q6ZN28 852 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 TMPRSS12Q86WS5 348 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 PHACTR4Q8IZ21 702 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 NSMCE1Q8WV22 266 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 APOLD1Q96LR9 279 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 CCDC42Q96M95 316 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 NUDCD1Q96RS6 583 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 ZNF670Q9BS34 389 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 CCDC86Q9H6F5 360 aaKnown RBP25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 OR1A2Q9Y585 309 aa25.43■■□□□ 1.66
AC009041.3-201ENST00000564390 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 NEMP2A6NFY4 417 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 TAF4O00268 1085 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 ELFN1P0C7U0 828 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 TRAF2Q12933 501 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 C1orf61Q13536 156 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 MARC1Q5VT66 337 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 NYAP1Q6ZVC0 841 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 DPPA4Q7L190 304 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 BBS5Q8N3I7 341 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 SLC35G2Q8TBE7 412 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 LRRN4Q8WUT4 740 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 NT5MQ9NPB1 228 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 B4GALT6Q9UBX8 382 aa25.42■■□□□ 1.66
AC009041.3-201ENST00000564390 ZZEF1O43149 2961 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 LY6G6EA0A0G2JKS1 128 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 TRABD2BA6NFA1 517 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 CPP00450 1065 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 JUPP14923 745 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 MAN1A1P33908 653 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 HNF1BP35680 557 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 GALNT2Q10471 571 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 ILKQ13418 452 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 INPP5AQ14642 412 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 PAFAH1B3Q15102 231 aaKnown RBP25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 TCEA2Q15560 299 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 PRRT3Q5FWE3 981 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 LIPIQ6XZB0 460 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 PROSER1Q86XN7 944 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 PLA2G15Q8NCC3 412 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 LRRC61Q9BV99 259 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 U3KQA8 63 aa25.41■■□□□ 1.66
AC009041.3-201ENST00000564390 ZFHX4Q86UP3 3567 aa25.4■■□□□ 1.66
AC009041.3-201ENST00000564390 AKR1B15C9JRZ8 316 aaPredicted RBP25.4■■□□□ 1.66
AC009041.3-201ENST00000564390 HTRA2O43464 458 aaPredicted RBP25.4■■□□□ 1.66
AC009041.3-201ENST00000564390 SOCS5O75159 536 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms