RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 RAP2CQ9Y3L5 183 aa10.53□□□□□ -0.72
RNF40-204ENST00000563683 NRAPQ86VF7 1730 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 RGSL1A5PLK6 1076 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 ARL5CA6NH57 179 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 H0YJX3 145 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 BEST1O76090 585 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 ALOX15P16050 662 aaPredicted RBP10.52□□□□□ -0.72
RNF40-204ENST00000563683 CHRNA4P43681 627 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 LIMK2P53671 638 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 KCNK10P57789 538 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 IRF9Q00978 393 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 KLF10Q13118 480 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 C16orf72Q14CZ0 275 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 NRF1Q16656 503 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 PFKFB4Q16877 469 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 TP53INP2Q8IXH6 220 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 LGI2Q8N0V4 545 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 ATAD1Q8NBU5 361 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 BHLHE22Q8NFJ8 381 aaPredicted RBP10.52□□□□□ -0.72
RNF40-204ENST00000563683 SEMA3CQ99985 751 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 VTI1BQ9UEU0 232 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 TRMT6Q9UJA5 497 aaKnown RBP10.52□□□□□ -0.72
RNF40-204ENST00000563683 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.72
RNF40-204ENST00000563683 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 MATN2O00339 956 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 CABYRO75952 493 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 FGF3P11487 239 aaPredicted RBP10.52□□□□□ -0.73
RNF40-204ENST00000563683 ITGB6P18564 788 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 PGGT1BP53609 377 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 OXCT1P55809 520 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 PSMD5Q16401 504 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 ZNF792Q3KQV3 632 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 TIGD5Q53EQ6 642 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 ZNF280DQ6N043 979 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 UBR7Q8N806 425 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 LPCAT1Q8NF37 534 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 GIPC3Q8TF64 312 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 UXTQ9UBK9 157 aaPredicted RBP10.52□□□□□ -0.73
RNF40-204ENST00000563683 WARS2Q9UGM6 360 aaKnown RBP10.52□□□□□ -0.73
RNF40-204ENST00000563683 PGAP2Q9UHJ9 254 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 FBXW11Q9UKB1 542 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 MYRFQ9Y2G1 1151 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 ANKRD6Q9Y2G4 727 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 PKP3Q9Y446 797 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 LTBP4Q8N2S1 1624 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 GLTPD2A6NH11 291 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 FAM159BA6NKW6 160 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 KPNA6O60684 536 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 SOAT2O75908 522 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 FGFR3P22607 806 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 FMO4P31512 558 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 ALDH7A1P49419 539 aaKnown RBP10.52□□□□□ -0.73
RNF40-204ENST00000563683 TUBA4AP68366 448 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 SREBF2Q12772 1141 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 CAPRIN1Q14444 709 aaKnown RBP10.52□□□□□ -0.73
RNF40-204ENST00000563683 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 FAR2Q96K12 515 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 COX4I2Q96KJ9 171 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 CCDC90BQ9GZT6 254 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 TLR8Q9NR97 1041 aaKnown RBP10.52□□□□□ -0.73
RNF40-204ENST00000563683 VPS45Q9NRW7 570 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 RIMS3Q9UJD0 308 aa10.52□□□□□ -0.73
RNF40-204ENST00000563683 RBBP6Q7Z6E9 1792 aaKnown RBP10.52□□□□□ -0.73
RNF40-204ENST00000563683 MRASO14807 208 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 H6PDO95479 791 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 C1QAP02745 245 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 CHRNGP07510 517 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 PIK3R1P27986 724 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 RPL9P32969 192 aaKnown RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 RAD51Q06609 339 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 SOX4Q06945 474 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 DPYSQ14117 519 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 PKN3Q6P5Z2 889 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 MOCOSQ96EN8 888 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 NPAS2Q99743 824 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 OSBPL11Q9BXB4 747 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 VRTNQ9H8Y1 702 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 GID8Q9NWU2 228 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 VPS28Q9UK41 221 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 TDRKHQ9Y2W6 561 aaKnown RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 LTBP3Q9NS15 1303 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 A0A1W2PQH9 124 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 MANSC4A6NHS7 340 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 PSMD12O00232 456 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 FGF10O15520 208 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 ATP5F1P24539 256 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 NFKBIAP25963 317 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 SLC5A3P53794 718 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 INSCQ1MX18 579 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 FBXO48Q5FWF7 155 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 TICAM1Q8IUC6 712 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 CFAP52Q8N1V2 620 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 PCSK9Q8NBP7 692 aaKnown RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 ZNF778Q96MU6 729 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 GBA3Q9H227 469 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 GIT1Q9Y2X7 761 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 ZBTB42B2RXF5 422 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 FAM72CH0Y354 149 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 RHOCP08134 193 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 DNAJB2P25686 324 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms