RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 PLEKHA7Q6IQ23 1121 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 ESRP1Q6NXG1 681 aaKnown RBP15.87■□□□□ 0.13
CLK3-211ENST00000563297 BRAT1Q6PJG6 821 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 ENPP7Q6UWV6 458 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 RBM44Q6ZP01 1051 aaKnown RBP15.87■□□□□ 0.13
CLK3-211ENST00000563297 SRLQ86TD4 932 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 HID1Q8IV36 788 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 TSEN2Q8NCE0 465 aaKnown RBP15.87■□□□□ 0.13
CLK3-211ENST00000563297 NAT6Q93015 286 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 SLC46A1Q96NT5 459 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 TUBGCP5Q96RT8 1024 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 DHX35Q9H5Z1 703 aaKnown RBP15.87■□□□□ 0.13
CLK3-211ENST00000563297 PCSK1NQ9UHG2 260 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 MYO6Q9UM54 1294 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 TMEM191CA6NGB0 347 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 ARHGAP42A6NI28 874 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 EEF2KO00418 725 aaKnown RBP15.86■□□□□ 0.13
CLK3-211ENST00000563297 C1QL1O75973 258 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 PRKCGP05129 697 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 PSMA2P25787 234 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 NFATC4Q14934 902 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 ELOCQ15369 112 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 AFMIDQ63HM1 303 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 ERAP2Q6P179 960 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 LVRNQ6Q4G3 990 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 NYAP1Q6ZVC0 841 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 ARHGAP12Q8IWW6 846 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 FSTL5Q8N475 847 aaPredicted RBP15.86■□□□□ 0.13
CLK3-211ENST00000563297 AOPEPQ8N6M6 819 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 GBP4Q96PP9 640 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 PEBP4Q96S96 227 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 KCTD15Q96SI1 283 aaPredicted RBP15.86■□□□□ 0.13
CLK3-211ENST00000563297 CCDC3Q9BQI4 270 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 SNRNP25Q9BV90 132 aaKnown RBP15.86■□□□□ 0.13
CLK3-211ENST00000563297 EDEM3Q9BZQ6 932 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
CLK3-211ENST00000563297 THSD1Q9NS62 852 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 GULP1Q9UBP9 304 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 ATP8A1Q9Y2Q0 1164 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 OR1A2Q9Y585 309 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 PCDHGA8Q9Y5G5 932 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 GCN1Q92616 2671 aaKnown RBP15.86■□□□□ 0.13
CLK3-211ENST00000563297 KALRNO60229 2985 aa15.86■□□□□ 0.13
CLK3-211ENST00000563297 ARHGEF17Q96PE2 2063 aaPredicted RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 EIF3CLB5ME19 914 aaKnown RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 NTN3O00634 580 aaPredicted RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 ATMINO43313 823 aaPredicted RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 PALMO75781 387 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 RASGRP1O95267 797 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 ALPIP09923 528 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 CTSEP14091 401 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 ERCC2P18074 760 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 HTR1BP28222 390 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 RBMS1P29558 406 aaKnown RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 MMP12P39900 470 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 SRP54P61011 504 aaKnown RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 NSUN2Q08J23 767 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLK3-211ENST00000563297 C19orf57Q0VDD7 668 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 BROXQ5VW32 411 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 PPP1R2P3Q6NXS1 205 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 PCSK4Q6UW60 755 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 RFX8Q6ZV50 586 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 CYP4V2Q6ZWL3 525 aaPredicted RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 RD3Q7Z3Z2 195 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 SDR16C5Q8N3Y7 309 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 WDR48Q8TAF3 677 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 KCNE4Q8WWG9 221 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 SCG3Q8WXD2 468 aaKnown RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 ECHDC3Q96DC8 303 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 NSMCE3Q96MG7 304 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 EIF3CQ99613 913 aaKnown RBP15.85■□□□□ 0.13
CLK3-211ENST00000563297 DPH1Q9BZG8 443 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 TRIM7Q9C029 511 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 CPNE5Q9HCH3 593 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 DOLKQ9UPQ8 538 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
CLK3-211ENST00000563297 LRP4O75096 1905 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 PMS2P1A4D2B8 440 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 CFAP69A5D8W1 941 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 LRRC53A6NM62 1247 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 KLK10O43240 276 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 DAPK3O43293 454 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 RNF8O76064 485 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 MIPP30301 263 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 PDX1P52945 283 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 SKOR1P84550 965 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 RALGDSQ12967 914 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 TCEA2Q15560 299 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 CFAP58Q5T655 872 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 KCTD16Q68DU8 428 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 LIPIQ6XZB0 460 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 ARHGAP36Q6ZRI8 547 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 ZNF571Q7Z3V5 609 aaPredicted RBP15.84■□□□□ 0.13
CLK3-211ENST00000563297 ARL10Q8N8L6 244 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 PLA2G15Q8NCC3 412 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 PCDH19Q8TAB3 1148 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 HAUS4Q9H6D7 363 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 ATP13A3Q9H7F0 1226 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 SIRPGQ9P1W8 387 aa15.84■□□□□ 0.13
CLK3-211ENST00000563297 RABGEF1Q9UJ41 708 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms