RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 OVGP1Q12889 678 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 TRAF2Q12933 501 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 RALGDSQ12967 914 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 WSCD2Q2TBF2 565 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 TMEM52BQ4KMG9 183 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 FAXCQ5TGI0 409 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 KCTD16Q68DU8 428 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 NCBP2-AS2Q69YL0 99 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 ERAP2Q6P179 960 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 NPNTQ6UXI9 565 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 CCNI2Q6ZMN8 369 aaPredicted RBP9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 TMPRSS7Q7RTY8 843 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 HID1Q8IV36 788 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 PELI3Q8N2H9 469 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 PLA2G15Q8NCC3 412 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 TEKT4Q8WW24 435 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 CENPTQ96BT3 561 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 EIF3CQ99613 913 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 CEP41Q9BYV8 373 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 GOLPH3Q9H4A6 298 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 NOD2Q9HC29 1040 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 DKK3Q9UBP4 350 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 B4GALT6Q9UBX8 382 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 MOSPD1Q9UJG1 213 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 SPTY2D1-AS1A0A0U1RR47 76 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 SSU72P8A0A1W2PR75 194 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 TSPAN11A1L157 253 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 CPED1A4D0V7 1026 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 LRRD1A4D1F6 860 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 GOLGA6CA6NDK9 693 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 GOLGA6BA6NDN3 693 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 TRABD2BA6NFA1 517 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 K7ESM1 405 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 TAF4O00268 1085 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 CPP00450 1065 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 KRT1P04264 644 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 ALPIP09923 528 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 GOLGA6DP0CG33 693 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 JUPP14923 745 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 MMP12P39900 470 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 MMP13P45452 471 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 PFN3P60673 137 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 DYNLT1P63172 113 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 DSC2Q02487 901 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 CYP4F3Q08477 520 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 ELP6Q0PNE2 266 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 SLC10A2Q12908 348 aaPredicted RBP9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 INPP5AQ14642 412 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 LRRC14Q15048 493 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 ACOX1Q15067 660 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 PROX2Q3B8N5 592 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 HS1BP3Q53T59 392 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 ANKRD20A8PQ5CZ79 823 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 HES3Q5TGS1 186 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 MARC1Q5VT66 337 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 ENPP7Q6UWV6 458 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 RFLNAQ6ZTI6 216 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 PARGQ86W56 976 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 PHACTR4Q8IZ21 702 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 LZTR1Q8N653 840 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 PQLC3Q8N755 202 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 ZNF548Q8NEK5 533 aaPredicted RBP9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 NSMCE1Q8WV22 266 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 FUBP1Q96AE4 644 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 RNF25Q96BH1 459 aaPredicted RBP9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 APOLD1Q96LR9 279 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 ZNF641Q96N77 438 aaPredicted RBP9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 LENG8Q96PV6 779 aaPredicted RBP9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 PSKH2Q96QS6 385 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 TUBGCP5Q96RT8 1024 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 SEMA3CQ99985 751 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 SYNDIG1Q9H7V2 258 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 GOLGA6AQ9NYA3 693 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 SIRPGQ9P1W8 387 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 UVRAGQ9P2Y5 699 aa9.53□□□□□ -0.88
NSMCE1-203ENST00000562039 H3BM21 787 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 AGRPO00253 132 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 TRAFD1O14545 582 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 GCATO75600 419 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 RECQL5O94762 991 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 DKK1O94907 266 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 CSF2P04141 144 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 ELFN1P0C7U0 828 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 NME1P15531 152 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 CKMT2P17540 419 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 KDELR1P24390 212 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 SERPINB6P35237 376 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 NOP2P46087 812 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 CSNK1DP48730 415 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 RENBPP51606 427 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 ZNF135P52742 658 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 AP1S1P61966 158 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 HNRNPKP61978 463 aaKnown RBP eCLIP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 TARDBPQ13148 414 aaKnown RBP eCLIP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 IHHQ14623 411 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 RFTN1Q14699 578 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 PAFAH1B3Q15102 231 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 CDKN3Q16667 212 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 PRRT3Q5FWE3 981 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms