RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 A0A1B0GVM2 712 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 TCAF2A6NFQ2 919 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 MAGEC1O60732 1142 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 PIGNO95427 931 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 S1PR4O95977 384 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 IRF1P10914 325 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 GLDCP23378 1020 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 PGM1P36871 562 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 NAGLUP54802 743 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 HTRA3P83110 453 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 ZNF177Q13360 481 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 CSHL1Q14406 222 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 RFTN1Q14699 578 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 VEPH1Q14D04 833 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 FAM83EQ2M2I3 478 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 DNAL1Q4LDG9 190 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 SLC9B1Q4ZJI4 515 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 ARL13AQ5H913 290 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 ADGRF1Q5T601 910 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 SETD3Q86TU7 594 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 ENDOVQ8N8Q3 282 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 MAPK15Q8TD08 544 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 BRSK1Q8TDC3 778 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 MOCOSQ96EN8 888 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 TMEM169Q96HH4 297 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 DNAJC1Q96KC8 554 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 TBATAQ96M53 351 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 NUDCD1Q96RS6 583 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 UNKQ9C0B0 810 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 RNF38Q9H0F5 515 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 C1orf21Q9H246 121 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 AGO1Q9UL18 857 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 RIMKLBQ9ULI2 386 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 PLA2G4CQ9UP65 541 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 ARL5AQ9Y689 179 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 C2orf78A6NCI8 922 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 OR51F1A6NGY5 319 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 MATN2O00339 956 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 ENTPD5O75356 428 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 RPP40O75818 363 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 LTA4HP09960 611 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 ATP5F1P24539 256 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 CCR10P46092 362 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 PPP3CCP48454 512 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 RPL14P50914 215 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 RAP1GDS1P52306 607 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 DNAJB13P59910 316 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 ILF2Q12905 390 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 TECRLQ5HYJ1 363 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 AGAP9Q5VTM2 703 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 LDB1Q86U70 411 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 LSMEM2Q8N112 164 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 PNPLA1Q8N8W4 532 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 GPR150Q8NGU9 434 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 AGR3Q8TD06 166 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 PDCD6IPQ8WUM4 868 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 SCG3Q8WXD2 468 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 TOP1MTQ969P6 601 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 WBP2Q969T9 261 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 ZNF689Q96CS4 500 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 DDX50Q9BQ39 737 aaKnown RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 ACSS2Q9NR19 701 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 NKX1-2Q9UD57 310 aaPredicted RBP9.86□□□□□ -0.83
SMG1-205ENST00000561947 TBC1D30Q9Y2I9 924 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 VWA7Q9Y334 891 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 ANKRD36A6QL64 1941 aa9.86□□□□□ -0.83
SMG1-205ENST00000561947 HDAC3O15379 428 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 NPHS1O60500 1241 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 TSPAN3O60637 253 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 WISP3O95389 354 aaPredicted RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 ANP32DO95626 131 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 GOT2P00505 430 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 LMNAP02545 664 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 NCF2P19878 526 aaPredicted RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 CR2P20023 1033 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 RGRP47804 291 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 RAB33AQ14088 237 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 C1orf53Q5VUE5 145 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 SEL1L3Q68CR1 1132 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 FAM45BPQ6NSW5 357 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 TXNDC5Q8NBS9 432 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 FAM45AQ8TCE6 357 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 STON2Q8WXE9 905 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 SUDS3Q9H7L9 328 aaPredicted RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 GPAMQ9HCL2 828 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 CCDC162PA2VCL2 907 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 PRRG1O14668 218 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 CD3EAPO15446 510 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 INSIG1O15503 277 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 BUD23O43709 281 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 GLP2RO95838 553 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 URODP06132 367 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 CCDC166P0CW27 439 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 RFC2P35250 354 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 SERPINB5P36952 375 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 MXRA7P84157 204 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 PFKPQ01813 784 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 TWF1Q12792 350 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 PTPRCAPQ14761 206 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms