RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SLC5A9Q2M3M2 681 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 PCID2Q5JVF3 399 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 PPM1LQ5SGD2 360 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 TEDDM1Q5T9Z0 273 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 PACS1Q6VY07 963 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 LEKR1Q6ZMV7 388 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RIPOR1Q6ZS17 1223 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RGS9BPQ6ZS82 235 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CYP2U1Q7Z449 544 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 WDR75Q8IWA0 830 aaKnown RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CNTN4Q8IWV2 1026 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 BBS7Q8IWZ6 715 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 DEFB123Q8N688 67 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MAB21L3Q8N8X9 362 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 HJURPQ8NCD3 748 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 IPMKQ8NFU5 416 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MYLIPQ8WY64 445 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MRPS31Q92665 395 aaKnown RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF669Q96BR6 464 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 PABPC5Q96DU9 382 aaKnown RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF837Q96EG3 531 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MFSD3Q96ES6 412 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CERS2Q96G23 380 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 PSKH2Q96QS6 385 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 TGS1Q96RS0 853 aaKnown RBP6.6□□□□□ -1.35
CAPN3-210ENST00000561817 RANBP9Q96S59 729 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CORO1BQ9BR76 489 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 FEM1AQ9BSK4 669 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF576Q9H609 170 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 TRPC7Q9HCX4 862 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MAN1C1Q9NR34 630 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ASAH2Q9NR71 780 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CHRAC1Q9NRG0 131 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 IL1RAPL1Q9NZN1 696 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 CFAP97Q9P2B7 532 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 KLF15Q9UIH9 416 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 TCAF1Q9Y4C2 921 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 MIA3Q5JRA6 1907 aa6.6□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 E2F8A0AVK6 867 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 MROH6A6NGR9 719 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SNAP91O60641 907 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 TBL1XO60907 577 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 LUC7L3O95232 432 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 GSRP00390 522 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PRLP01236 227 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 EPOP01588 193 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 MT-ND3P03897 115 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ALDOAP04075 364 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PRKCGP05129 697 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 RHOP08100 348 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 HNRNPA1P09651 372 aaKnown RBP eCLIP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 MYL4P12829 197 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PTPN2P17706 415 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 TAC1P20366 129 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ADRA1DP25100 572 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 DDX6P26196 483 aaKnown RBP eCLIP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 CNTFP26441 200 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 GABRB3P28472 473 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PLK1P53350 603 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 OXCT1P55809 520 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ACVR1Q04771 509 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 DNAJC3Q13217 504 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF177Q13360 481 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 GPM6BQ13491 265 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 BMPR2Q13873 1038 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 TEAD2Q15562 447 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SIRPB2Q5JXA9 342 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 MPP7Q5T2T1 576 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 FYB2Q5VWT5 728 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 RNF219Q5W0B1 726 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PDE12Q6L8Q7 609 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ESRP1Q6NXG1 681 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 CASC4Q6P4E1 433 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 LYPD4Q6UWN0 246 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 CDHR3Q6ZTQ4 885 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 EP400NLQ6ZTU2 488 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 MICALCLQ6ZW33 695 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PIGWQ7Z7B1 504 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ADGRD2Q7Z7M1 963 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 CTAGE3PQ8IX95 158 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 LRRC34Q8IZ02 419 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ANKRD42Q8N9B4 389 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 DNAAF3Q8N9W5 541 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 BCAS4Q8TDM0 211 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF473Q8WTR7 871 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 USP13Q92995 863 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ALKBH8Q96BT7 664 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 MTBPQ96DY7 904 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 TMA16Q96EY4 203 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 CHMP6Q96FZ7 201 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 APOPT1Q96IL0 206 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 FEM1CQ96JP0 617 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SAMD11Q96NU1 681 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SMC6Q96SB8 1091 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 AGAP2Q99490 1192 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 GAS2L1Q99501 681 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 KLF6Q99612 283 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms