RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 C2CD4CQ8TF44 421 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 RUFY2Q8WXA3 655 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 MAP4K1Q92918 833 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 CLMNQ96JQ2 1002 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 PHF7Q9BWX1 381 aaPredicted RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 TM2D2Q9BX73 214 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 SEMA4CQ9C0C4 833 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 ACTR5Q9H9F9 607 aaPredicted RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 TLR8Q9NR97 1041 aaKnown RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 KCND2Q9NZV8 630 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 MPP6Q9NZW5 540 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 ORC3Q9UBD5 711 aaPredicted RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 UPB1Q9UBR1 384 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 SWAP70Q9UH65 585 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 CAMK2AQ9UQM7 478 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 USP16Q9Y5T5 823 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 PKD1L3Q7Z443 1732 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 TOGARAM1Q9Y4F4 1720 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 TNRC6CQ9HCJ0 1690 aaKnown RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 MAP3K15Q6ZN16 1313 aa3.96□□□□□ -1.77
HERC1-215ENST00000561436 KIF13BQ9NQT8 1826 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 TEX13CA0A0J9YWL9 993 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 C17orf113A0A1B0GUU1 675 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 SMIM35A0A1B0GVV1 85 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 KCNU1A8MYU2 1149 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 CEP104O60308 925 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 ZBED4O75132 1171 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 CCNDBP1O95273 360 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 TUBB4AP04350 444 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 HSP90AA1P07900 732 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 PSMA4P25789 261 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 YWHAQP27348 245 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 HOXA7P31268 230 aaPredicted RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 ABCD1P33897 745 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 MTNR1AP48039 350 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 ZNF81P51508 661 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 EIF3BP55884 814 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 HUNKP57058 714 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 RPS13P62277 151 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 YWHAZP63104 245 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 ARF1P84077 181 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 RHAGQ02094 409 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 STIM1Q13586 685 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 ETFDHQ16134 617 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 SLC18A3Q16572 532 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 EDRF1Q3B7T1 1238 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 PLK5Q496M5 336 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 SH2D4BQ5SQS7 431 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 TTC39AQ5SRH9 613 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 CCDC30Q5VVM6 783 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 KIAA1614Q5VZ46 1190 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 SLC18B1Q6NT16 456 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 MZT2BQ6NZ67 158 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 INO80CQ6PI98 192 aaPredicted RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 FBXO46Q6PJ61 603 aaPredicted RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 IL20RBQ6UXL0 311 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 C1orf122Q6ZSJ8 110 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 FAM57BQ71RH2 274 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 NEK8Q86SG6 692 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 TBC1D1Q86TI0 1168 aaPredicted RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 MON1AQ86VX9 555 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 CHD1LQ86WJ1 897 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 CCDC25Q86WR0 208 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 DIS3L2Q8IYB7 885 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 ZNF34Q8IZ26 560 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 CPXM2Q8N436 756 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 DPP10Q8N608 796 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 C8orf58Q8NAV2 365 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 C11orf65Q8NCR3 313 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 DCPSQ96C86 337 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 ELP4Q96EB1 424 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.96□□□□□ -1.78
HERC1-215ENST00000561436 UTP14AQ9BVJ6 771 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 SLC25A18Q9H1K4 315 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 RNF186Q9NXI6 227 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 MAP3K20Q9NYL2 800 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 SLC25A10Q9UBX3 287 aaPredicted RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 FBXO9Q9UK97 447 aaPredicted RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 FBXO4Q9UKT5 387 aa3.96□□□□□ -1.78
HERC1-215ENST00000561436 GOLGB1Q14789 3259 aaKnown RBP3.96□□□□□ -1.78
HERC1-215ENST00000561436 MAP2P11137 1827 aaKnown RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 TCRBV7S3A2A0A539 114 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 ARHGAP10A1A4S6 786 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 SLC22A23A1A5C7 686 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 CXorf65A6NEN9 183 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 RHODO00212 210 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 PPP6CO00743 305 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 ADAM10O14672 748 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 PRPF4O43172 522 aaKnown RBP eCLIP3.95□□□□□ -1.78
HERC1-215ENST00000561436 SCGB1D1O95968 90 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 HMOX1P09601 288 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 IRF1P10914 325 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 FCGR2AP12318 317 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 CAPN3P20807 821 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 KLRC2P26717 231 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 POU1F1P28069 291 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 ARL3P36405 182 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 CPA2P48052 419 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 GMPSP49915 693 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms