RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 KIAA1161Q6NSJ0 714 aa14□□□□□ -0.17
TPM1-230ENST00000561266 TIGD7Q6NT04 549 aaPredicted RBP14□□□□□ -0.17
TPM1-230ENST00000561266 NYAP1Q6ZVC0 841 aa14□□□□□ -0.17
TPM1-230ENST00000561266 BBS12Q6ZW61 710 aa14□□□□□ -0.17
TPM1-230ENST00000561266 CCDC50Q8IVM0 306 aa14□□□□□ -0.17
TPM1-230ENST00000561266 PIH1D2Q8WWB5 315 aa14□□□□□ -0.17
TPM1-230ENST00000561266 CAMK1GQ96NX5 476 aa14□□□□□ -0.17
TPM1-230ENST00000561266 RTKNQ9BST9 563 aa14□□□□□ -0.17
TPM1-230ENST00000561266 MBNL1Q9NR56 388 aaKnown RBP14□□□□□ -0.17
TPM1-230ENST00000561266 AMFRQ9UKV5 643 aa14□□□□□ -0.17
TPM1-230ENST00000561266 TCRBV7S2A1N4TA0A589 114 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 GOLGA8CPA6NN73 597 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 PRAMEF26H0Y7S4 382 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 TLR4O00206 839 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 NEMP1O14524 444 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 FZD6O60353 706 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 ZFXP17010 805 aaPredicted RBP13.99□□□□□ -0.17
TPM1-230ENST00000561266 HNRNPA2B1P22626 353 aaKnown RBP13.99□□□□□ -0.17
TPM1-230ENST00000561266 IGFALSP35858 605 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 NXPH1P58417 271 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 FAM193AP78312 1265 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 SKOR1P84550 965 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 IL9RQ01113 521 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 ITKQ08881 620 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 WASHC5Q12768 1159 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 TFDP2Q14188 446 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 PUM1Q14671 1186 aaKnown RBP eCLIP13.99□□□□□ -0.175e-9■□□□□ 8.1
TPM1-230ENST00000561266 PDK1Q15118 436 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 ZNF423Q2M1K9 1284 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 ODF2Q5BJF6 829 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 PEX26Q7Z412 305 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 ZC3H18Q86VM9 953 aaKnown RBP13.99□□□□□ -0.17
TPM1-230ENST00000561266 SLC22A18ASQ8N1D0 253 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 PELI3Q8N2H9 469 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 MFSD2AQ8NA29 543 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 TP53I13Q8NBR0 393 aaPredicted RBP13.99□□□□□ -0.17
TPM1-230ENST00000561266 CCDC112Q8NEF3 446 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 OR13H1Q8NG92 308 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 PDCD6IPQ8WUM4 868 aaKnown RBP13.99□□□□□ -0.17
TPM1-230ENST00000561266 NSMCE1Q8WV22 266 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 CENPTQ96BT3 561 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 HES6Q96HZ4 224 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 RBM41Q96IZ5 413 aaKnown RBP13.99□□□□□ -0.17
TPM1-230ENST00000561266 CALR3Q96L12 384 aaKnown RBP13.99□□□□□ -0.17
TPM1-230ENST00000561266 OSBPL8Q9BZF1 889 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 BRD8Q9H0E9 1235 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 LZTFL1Q9NQ48 299 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 B4GALT6Q9UBX8 382 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 DMTF1Q9Y222 760 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 TTLL3Q9Y4R7 772 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 RAI2Q9Y5P3 530 aa13.99□□□□□ -0.17
TPM1-230ENST00000561266 SPEGQ15772 3267 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 CACNA1AO00555 2505 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.98□□□□□ -0.17
TPM1-230ENST00000561266 OPHN1O60890 802 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 PGLSO95336 258 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 ALPIP09923 528 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 C6P13671 934 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 CTPS1P17812 591 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 TGM2P21980 687 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 LHCGRP22888 699 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 PTPN3P26045 913 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 CD68P34810 354 aaPredicted RBP13.98□□□□□ -0.17
TPM1-230ENST00000561266 PTPN7P35236 360 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 LIG3P49916 1009 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 RWDD2BP57060 319 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 TEAD4Q15561 434 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 LIPIQ6XZB0 460 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 RFLNAQ6ZTI6 216 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
TPM1-230ENST00000561266 ABI3BPQ7Z7G0 1075 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 PIP4P1Q86T03 277 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 TSPAN33Q86UF1 283 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 BBS5Q8N3I7 341 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 CXorf40AQ8TE69 158 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 AGAP3Q96P47 875 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 ZDHHC5Q9C0B5 715 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 POLR1EQ9GZS1 481 aaKnown RBP13.98□□□□□ -0.17
TPM1-230ENST00000561266 SEPT10Q9P0V9 454 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 PNMA8BQ9ULN7 279 aaPredicted RBP13.98□□□□□ -0.17
TPM1-230ENST00000561266 CHKBQ9Y259 395 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 BTBD3Q9Y2F9 522 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
TPM1-230ENST00000561266 LRP4O75096 1905 aa13.98□□□□□ -0.17
TPM1-230ENST00000561266 NPIPB15A6NHN6 443 aaPredicted RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 F5H423 210 aaPredicted RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 SH3BP5O60239 455 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 SOCS5O75159 536 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 CPP00450 1065 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 THEGLP0DJG4 465 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 XPAP23025 273 aaPredicted RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 NUDT1P36639 197 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 CD86P42081 329 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 NR2C2P49116 596 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 ATXN3P54252 364 aaPredicted RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 C21orf59P57076 290 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms